Gene OSTLU_19001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_19001 
Symbol 
ID5006577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp203133 
End bp204131 
Gene Length999 bp 
Protein Length332 aa 
Translation table 
GC content63% 
IMG OID640421998 
Productpredicted protein 
Protein accessionXP_001422519 
Protein GI145356607 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.424029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00246987 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCGTC CGCGCGTGCT CTTTTGCGGT CTAGAATTCG AAGACGGCTA CGCCCACACG 
CGCGCGTACG TCGACGACAA CGATCTCGAC GTGGACGTCG CGCGATGCGC GCGCGAGGAC
GTCGCGCGCG AGATCTCGCG CTGCGATGTC GCCGTTCCGC TCATGACGAA ACTCGACGCC
GAGCTGTTGA AAATCGGCGC CGCCGGCGCG CTGACGCACG TCCTGCAGTT CGGCGTCGGG
TTAGAGGGCG TGGACATCGA GTGCGCGACC GCGCTGGGCG TCACCGTGGC GCGGATCCCT
TCGGAGAAGA CGGGGAACGC GACGAGCACG GCGGAGCTCG CGGTGTACTT GGTCCTGGCG
GCGCTGCGAC GTCACGACGC CATGTCGGCG AGCGTGCGGA GTCGTAAACT CGGCGCGCCG
ACGGGGAACG CGCTGAGCGA GTGCGAGGTG ATGATACTGG GATGGGGGGC GATCGGGGTG
AAGATTGCGG CGCGATTGCG CGGATTTGAG TGCGCGTTGA CGGCGGCGCG TAAATCAAAG
TGGGCCGAGG ACGAGAGCGA TCGATGTGGG ATACCGTTGC GAGCGGTGTG CGGGACGAGC
GACCGGGATG GATTGCGTGC GCTGTTGCGC GCGGCGGACG TGGTGTGCGT CGCGTGCACG
CAAGATCCGT CGAACGCCGG GATGATCGAC GACGAGTTTT TGGCGGCGAT GAAGCCGGGC
GCGGCGTTGG TGAACATCGC GAGAGGGGGC TTGTTCGATC GCGACGCCGT GTTGAAAAGC
TTGAAAAGTG GGCATTTGGG TTATTTAGCG AGCGATGTGG CGTGGAGTGA ACCTGTCGAT
CCCGAGGATC CGATCGTTCG GCACGAGCAC ACGTACTTCA CGCCTCACAT CGCCGGAGTG
ACGCACTCGA GCTATAGAAT GATGGGGGAA ATAGTCGCGA CTAGCGCGTC TCGCTTGGTC
GAGTTTAGGA AATTAACCGA TATACAGGTT GTGAATTAA
 
Protein sequence
MRRPRVLFCG LEFEDGYAHT RAYVDDNDLD VDVARCARED VAREISRCDV AVPLMTKLDA 
ELLKIGAAGA LTHVLQFGVG LEGVDIECAT ALGVTVARIP SEKTGNATST AELAVYLVLA
ALRRHDAMSA SVRSRKLGAP TGNALSECEV MILGWGAIGV KIAARLRGFE CALTAARKSK
WAEDESDRCG IPLRAVCGTS DRDGLRALLR AADVVCVACT QDPSNAGMID DEFLAAMKPG
AALVNIARGG LFDRDAVLKS LKSGHLGYLA SDVAWSEPVD PEDPIVRHEH TYFTPHIAGV
THSSYRMMGE IVATSASRLV EFRKLTDIQV VN