Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_13495 |
Symbol | |
ID | 5006833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009374 |
Strand | + |
Start bp | 524017 |
End bp | 524778 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | |
GC content | 63% |
IMG OID | 640422254 |
Product | predicted protein |
Protein accession | XP_001422618 |
Protein GI | 145356810 |
COG category | [A] RNA processing and modification |
COG ID | [COG5246] Splicing factor 3a, subunit 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.595662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCA TGGACGCGCG CGAGCACGGG TCGAAGATCG GCGGCGGGGG CGTGGCGTCG GCGAGCCAGG GCGCGGTGGA TCGGCGCGAG CGCCTGCGAC GGTTGGCGCT GGAGACGATC GATCTGGCGA AAGATCCGTA CTTCATGCGG AATCATCTCG GGTCGTACGA GTGCAAGCTG TGCCTGACGA TGCACGCGAA CGAGGGGAAT TACCTGGCGC ACACGCAGGG GAAGCGACAC CAACAAAATT TGGCGAAACG CGCGGCGAGG GACGCGAAGG ACGCGGACGC GAGCTTCGGG AAGTCGAAAA CGGCGACGAT ACAGCCGAGG AAGACGATGA AGATCGGACG ACCCGGGTAC AGGGTGACGA AACAGTACGA TAGAAGGACG CGACAGCGGA GCCTGTTGTT TCAGGTGGAC TACCCCGAAC GCGAGCTCGG AACCAAGCCG AGGTATCGGT TCATGTCGGC GTACGAACAG AAAGTCGAGG CGTGGGATAA GCGGTATCAG TACGTGCTGT TCGCGTGCGA ACCGTACGAG ACGATTGGGT TCAAAATTCC AAACGTGGAC GTGGACAAGG CGGGACGGGA TAAATTTTTC ACGCACTGGG ACGAGGACGT CAAGACGTAC ACGTGTCAGT TGACGTTTCG TCGCGTCGAC GGCGACGGCG CGCCCCGCGG CGGTGGAATG CCGCGCGGTG GCATACCGCC GCCGCCGATG GTGGGCGGAT TACCGCCGCC GCCGCCGCCG CCGGTTCGCT GA
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Protein sequence | MSFMDAREHG SKIGGGGVAS ASQGAVDRRE RLRRLALETI DLAKDPYFMR NHLGSYECKL CLTMHANEGN YLAHTQGKRH QQNLAKRAAR DAKDADASFG KSKTATIQPR KTMKIGRPGY RVTKQYDRRT RQRSLLFQVD YPERELGTKP RYRFMSAYEQ KVEAWDKRYQ YVLFACEPYE TIGFKIPNVD VDKAGRDKFF THWDEDVKTY TCQLTFRRVD GDGAPRGGGM PRGGIPPPPM VGGLPPPPPP PVR
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