Gene OSTLU_13495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_13495 
Symbol 
ID5006833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp524017 
End bp524778 
Gene Length762 bp 
Protein Length253 aa 
Translation table 
GC content63% 
IMG OID640422254 
Productpredicted protein 
Protein accessionXP_001422618 
Protein GI145356810 
COG category[A] RNA processing and modification 
COG ID[COG5246] Splicing factor 3a, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.595662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCA TGGACGCGCG CGAGCACGGG TCGAAGATCG GCGGCGGGGG CGTGGCGTCG 
GCGAGCCAGG GCGCGGTGGA TCGGCGCGAG CGCCTGCGAC GGTTGGCGCT GGAGACGATC
GATCTGGCGA AAGATCCGTA CTTCATGCGG AATCATCTCG GGTCGTACGA GTGCAAGCTG
TGCCTGACGA TGCACGCGAA CGAGGGGAAT TACCTGGCGC ACACGCAGGG GAAGCGACAC
CAACAAAATT TGGCGAAACG CGCGGCGAGG GACGCGAAGG ACGCGGACGC GAGCTTCGGG
AAGTCGAAAA CGGCGACGAT ACAGCCGAGG AAGACGATGA AGATCGGACG ACCCGGGTAC
AGGGTGACGA AACAGTACGA TAGAAGGACG CGACAGCGGA GCCTGTTGTT TCAGGTGGAC
TACCCCGAAC GCGAGCTCGG AACCAAGCCG AGGTATCGGT TCATGTCGGC GTACGAACAG
AAAGTCGAGG CGTGGGATAA GCGGTATCAG TACGTGCTGT TCGCGTGCGA ACCGTACGAG
ACGATTGGGT TCAAAATTCC AAACGTGGAC GTGGACAAGG CGGGACGGGA TAAATTTTTC
ACGCACTGGG ACGAGGACGT CAAGACGTAC ACGTGTCAGT TGACGTTTCG TCGCGTCGAC
GGCGACGGCG CGCCCCGCGG CGGTGGAATG CCGCGCGGTG GCATACCGCC GCCGCCGATG
GTGGGCGGAT TACCGCCGCC GCCGCCGCCG CCGGTTCGCT GA
 
Protein sequence
MSFMDAREHG SKIGGGGVAS ASQGAVDRRE RLRRLALETI DLAKDPYFMR NHLGSYECKL 
CLTMHANEGN YLAHTQGKRH QQNLAKRAAR DAKDADASFG KSKTATIQPR KTMKIGRPGY
RVTKQYDRRT RQRSLLFQVD YPERELGTKP RYRFMSAYEQ KVEAWDKRYQ YVLFACEPYE
TIGFKIPNVD VDKAGRDKFF THWDEDVKTY TCQLTFRRVD GDGAPRGGGM PRGGIPPPPM
VGGLPPPPPP PVR