Gene OSTLU_42228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42228 
Symbol 
ID5006503 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009373 
Strand
Start bp137950 
End bp139389 
Gene Length1440 bp 
Protein Length460 aa 
Translation table 
GC content61% 
IMG OID640421924 
Productpredicted protein 
Protein accessionXP_001422403 
Protein GI145356366 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCG GACCGCGCGC GAGCGCGAGC GGCGCCGTCG GACGCGCGGA CGCGCCGTAC 
GACGCGCTGA ATCGCGTGCG CGAGAGCGGC GAGGGCGTCG ATGAAATTCA TCGACGTTGG
CGCGCCGCGC ACGCGTCTGG AGACGCGCCC GAGATCGAAT TCGCGCGCGG GAGCGAGGGA
TTACTGCCGG AGTACGACGT CATCGTCGTC GGCGCGGGAC TGAGCGGATG CACGATCGCC
GAGCGGTGCT CGAGGGCGCT GGGGATGAAG GTGTTGACGC TCGAGCGGCG CGCGCACGCG
GGGGGGAATT GCTACGATTA CGTCGACGCG CGGAGCGGGA TACGATGCTC GAAGTACGGC
GCGCATTTGT TTCACACGAA ACACGCGCGC GTGTGGGAAT ACGTGACGCG GTTCAGTGAG
TGGGTGCCTT TCGATCATCG CGTGCTCGGT CGGGTGACGC GGACGAGCGC GAGCGAGGAG
GGGAAGCGAG CGCGCGTGCT CGTGCCCATA CCGCCGACGC GAGCGACGGT GAACGCGCTG
TTCGATGATG CAGACGTGCG GAGCGATGAA GATATGGAGG CGTGGTACGA ACGGGAGAGG
ATTCATCCCG AGGGCGGGCG GGCGCCGGCG AACGGCGAGG AGGCGGCGCT GTCGCGCGTC
GGACCGCGGT TGTATGAGGC GATATTTAAG CATTACACGA AGAAACAGTG GGATAAGTAC
CCCGAAGAGT TAGACGCGAG CGTGTTGATG CGGTTGCCGT GTCGAACGAG CGCGGACGAT
CGGTACTTTA ACGACCCGTG GCAGGCGTTG CCGAGACGCG GGTACACGAG AATTTTTGAA
AACATGCTTC ACGGGGACGA GAACATCACC GTTCGGCTGA ATTGCGATTA TTTCGCGATG
AAGCGGGATG GAACTCTTCC CAAACACAAA TTTTTAGTGT ACACGGGACA GATTGACTCG
TACTACGCCG CGCTTGGTAT GCCAAAGTTG GAGTACCGCT CGTTGCGCTT TGAGGAAGAG
TACGTCGAGG GCGTTAAAGA CGAAGACGCC GACGATGCCG ATGCCGACGA CGACAGCGGC
TTGTTTTTCC AAGAGGCGAT GGTGGTGAAT TATCCTGGCC CTGACGTTCC GTTCACGCGT
ATCGTCGAGT ATAAACACAT GCCGAACCAA CCCGAAGGTA GACATCGCGA ACCGGGCACG
CTCGTCGCCC GCGAGTACTC GAGCGCGACG GGCGAGCCGT ATTACCCCGT CCCCAACCCC
GAAAACCGCG CACTGTACGA AAAATACGCG GAATTAGCGA AACATGAACC TGGGGTCGCC
TTCGTCGGTC GTTTGGCGAG TTACAAGTAC TTCAACATGG ACGAAGCCGT GTTAAACGCG
CTCGAAATGT TTGACAACTT GCGAGACACC GGCGCGTTGG TCGTCAAGGA AAAATCTTGA
 
Protein sequence
MPRGPRASAS GAVGRADAPY DALNRVRESG EGVDEIHRRW RAAHASGDAP EIEFARGSEG 
LLPEYDVIVV GAGLSGCTIA ERCSRALGMK VLTLERRAHA GGNCYDYVDA RSGIRCSKYG
AHLFHTKHAR VWEYVTRFSE WVPFDHRVLG RVTRTSASEE GKRARVLVPI PPTRATVNAL
FDDADVRSDE DMEAWYERER IHPEGGRAPA NGEEAALSRV GPRLYEAIFK HYTKKQWDKY
PEELDASVLM RLPCRTSADD RYFNDPWQAL PRRGYTRIFE NMLHGDENIT VRLNCDYFAM
KRDGTLPKHK FLVYTGQIDS YYAALGMPKL EYRSLRFEED GLFFQEAMVV NYPGPDVPFT
RIVEYKHMPN QPEGRHREPG TLVAREYSSA TGEPYYPVPN PENRALYEKY AELAKHEPGV
AFVGRLASYK YFNMDEAVLN ALEMFDNLRD TGALVVKEKS