| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_42210 |
|---|
| Symbol | |
|---|
| ID | 5006432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009373 |
|---|
| Strand | - |
|---|
| Start bp | 53409 |
|---|
| End bp | 55577 |
|---|
| Gene Length | 2169 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640421853 |
|---|
| Product | P-ATPase family transporter: proton |
|---|
| Protein accession | XP_001422424 |
|---|
| Protein GI | 145356409 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.0061008 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000000248027 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTGT TGGGGTTGGT TTTCGGTAAC GCGTGGGTGT CGCACGTCGA GAGGGAGGAC
GCGGTGCGGG CGAGTCGGGA GTTGGCGGAG CTCGTGGACG CTCGAGCGAC GGTGACGAGA
TCGGGGACGT CGCGCGTCGT CGACGCGCGT TTTCTCGTGC CGGGAGACAT CGTCACGCTC
ACGCCCGGGT GTGCGGTGCC CGCGGATTGC GTGTCGTGCG GACCGCAGAC GTTGGTTTTG
GATAATTCTT TGATCACGGG CGACAGGCAC ACCGTCGACG TCGCGAAGGG CGAACCGTTG
TTCACGCGAG GCGTCGTCAA GCGCGGCTCC GCGAGAGCGA TGGTGGTGCG CACCGGAAAA
CACACATTCG CTGGGCGCGC GGCGCGCGTG ATGCGAGCCA GAGATTCATC TCGCAAGGAA
ATGTCCGCGT TCGACGCGAA CGTGTCCATC GTCACGCGCT CGTTCGCGGT GGTCGGATGC
GCGTCCTCGC TGAGCGTATT CTTGTACCTC ATCGTGGGGG GGAAGGACTT CTTCCGCTCG
CTATCGTTTG CGGTCATTCT TTTGATCATC AGCACACCTT TGGCGATTCG AACGATCGTG
CACACGACGA CCTCTTTGGG CGTTCGCGCG TTGGCGAAAA AATCGTGCAT CGTCGCGCGC
GCGCGCGTCA TCGAAGATTT GGCTCTCATG AACGTCTTGT GCGTCGATAA AACCGGAACG
TTGACTAAAG ATGCCGCAAA ACTGAGCTCG ATCGTTCCCA CGGTGCCTTT ACTCGAGGGT
GTCAGCGAAA ACGACGTCAT GACGGCGGCG GCGATGGGAA CGCGATGGAA GGAGCCGCCG
ACAAACGCCG TGGACGCGAT GATTTTAGAC GCCTTTGACG TCGCGCGACA CTTGGAAGGG
AAGTTCGAAC TCGTAGAGCA TCGACCTTTC GATGTCTCGG CAAAGAGAAA ATTCAGTGAA
AGCATCATCC GTCGAGCGAA CGACGGATCG ACGTTTCGCG TGATGAAGGG CCCGATCGAC
GTCGCGCTAG AAAAGTGTGT CAACCGCGAG AGCGCGCAAG CCATCGTCGA CGACGCGCTC
GAGCAGTTGC AATCTCGCGC GGCGGCGGGA GTGATTTCTC GCGCACTCTT GGTGGCTTGT
TCGAAAACCC ACGACGATTC GTACGTCGGT CTGGGTTTGA TTATGTACGA CGACGTGCGT
CGCAAGGACG CGCACGAGAT GCTGCACGCG ATGCAATCGC TCGGCGTCGA CGTAAAAATC
GTCACTAGTG ATGTCGCTCG GGTCGCGCGC GTGGCGTGCG ATAAGATTGG TTTCGATCTG
AGCGAGAATT CTGACGGAAT CATCCACACT CCGAGCGATG TACCGTACGT GCCTCTTCGC
GCGAGCGTGC TGAGCCCGGC GCACTGCGAC AAGCTCGATC GCATGAAGGC TTACGCCGAA
ATGCTACCCG AGGACAAGCA CGCGCTGGTG AAGGCCCATC GCGCTAAGGG TGACATCGTC
GGTTTAGTGA GTGATGGCGC GAGCGATAGC GCGGCGCTTC AGCTCGCACA TGTGGGAGTG
TCGATGAATA ACGCTAGCGA CGCCGCGCGA TGCGCGTCCG ACATCATATT AGCCGCGCCG
TCGCTCGCAG CCTTGGCGCA CGCGGTTCTC TCTGCCCGAG TGATGTTCGC GCGCGTGCGT
GAATACATTG TATTTCGTGC GACGTGCACG GCGCACGTCT TGGGATTTTT TGTATTTGGC
GCCCTCGTGG TGAGTCCAAA ATCTTTCGAC GTCTCCGCGC CGGATACGTT TACGCTCCCA
GTCATCGCGT TGTGCGTCAA CGCCGCGCTC AATGACGTTG TCGTCATCGG CACCGCGTAC
GACCACACCT CACCGAGCCG TTTACCAGAG CGTTGGAATT TACTTCCGCA CGTCTTCGTC
AGCGCGGCGA GCGGCTTCAC GGCGTGTTTC ACGACTCTGG CGTTACTGCG CGTGGCGCTG
AGCGCTCGAT TACCGTACGG CGAGGTGCAA ACCTGTGTGT TTCTCAAGCT CACGCTCACG
GACGCGATGA CGGTTTTCAG CGCTCGTGCG CACAAGTCGT TCCTCGAGCG ACGCCCAGGG
GGGCTAGTTT TGGCTGCGTT CGCCACGTCA TTGACGATGA GTTGCTTGTT GAGCGCGAAT
TGGCCCTTC
|
|---|
| Protein sequence | MILLGLVFGN AWVSHVERED AVRASRELAE LVDARATVTR SGTSRVVDAR FLVPGDIVTL
TPGCAVPADC VSCGPQTLVL DNSLITGDRH TVDVAKGEPL FTRGVVKRGS ARAMVVRTGK
HTFAGRAARV MRARDSSRKE MSAFDANVSI VTRSFAVVGC ASSLSVFLYL IVGGKDFFRS
LSFAVILLII STPLAIRTIV HTTTSLGVRA LAKKSCIVAR ARVIEDLALM NVLCVDKTGT
LTKDAAKLSS IVPTVPLLEG VSENDVMTAA AMGTRWKEPP TNAVDAMILD AFDVARHLEG
KFELVEHRPF DVSAKRKFSE SIIRRANDGS TFRVMKGPID VALEKCVNRE SAQAIVDDAL
EQLQSRAAAG VISRALLVAC SKTHDDSYVG LGLIMYDDVR RKDAHEMLHA MQSLGVDVKI
VTSDVARVAR VACDKIGFDL SENSDGIIHT PSDVPYVPLR ASVLSPAHCD KLDRMKAYAE
MLPEDKHALV KAHRAKGDIV GLVSDGASDS AALQLAHVGV SMNNASDAAR CASDIILAAP
SLAALAHAVL SARVMFARVR EYIVFRATCT AHVLGFFVFG ALVVSPKSFD VSAPDTFTLP
VIALCVNAAL NDVVVIGTAY DHTSPSRLPE RWNLLPHVFV SAASGFTACF TTLALLRVAL
SARLPYGEVQ TCVFLKLTLT DAMTVFSARA HKSFLERRPG GLVLAAFATS LTMSCLLSAN
WPF
|
|---|
| |