Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_3270 |
Symbol | |
ID | 5006464 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009373 |
Strand | - |
Start bp | 142857 |
End bp | 144440 |
Gene Length | 1584 bp |
Protein Length | 478 aa |
Translation table | |
GC content | 66% |
IMG OID | 640421885 |
Product | predicted protein |
Protein accession | XP_001422446 |
Protein GI | 145356453 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 0.37953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCGCAGACGA AGACGGCGTA CGTGTGCGCC GAGTGCGGCG AGGACTCGCG GCAGTGGCTG GGACAGTGCC CGGCGTGCAA GAGCTGGGAC ACGATGAAGG CGATCGCGCT GGCGCCGACC TCGGGAGGCG GCGCGGGGAA GGCGAGCGCG GGCGGCGGGG CGGGCGCGCG AGCGGTGGCG CGGATGGCGG AGAACGCGAC GACGCGCGGG AACGCGAACG GGCGAGGACG CGCGAGCGAC GGCGCGCGAG CGCTCGGGTG GGTCGCGGAG ACGAGCGCGC CGCGAGCGCT CGGGGACGTG CTGAGGCCGC GAGCGAACGG GGAGAGGCAA ACGATGCCGA GGATGCGGTT GAGAGAGGAA TTGGGGAAGG AGATCGAGCG GGTGTTAGGC GGGGGAGTGG TTCCGGGCGG GATGATTCTC GTCGGTGGCG ATCCGGGGGT GGGGAAGTCG ACGATTTTGT TACAGCTCGC GGGACTTCTG GGCGCGCGAG GCGAGGAACG AGAGGGCGAA GAAGACGGCG CGAACGAATC GATCGCCGCG GGAGGCGTGC TTTACGCGTC TGGCGAAGAG TCCGTGGAGC AAGTCGCCGG ACGCGCCGAG CGCATGGGGA TTGATCCGAA CGGGATTTAT TTATACAGCG CAACGCGCCT GGAAAATATT CTCGAGGCGG TGTCGACGCT CAAGCCCGCG GCGCTCGTGG TGGATTCCAT TCAAACCGTG TTCTTGGAAG ACGCCACGGG AAGCCCGGGA AGCGTGTCTC AGGTGCGCGA GTGCGCCACC GCGCTGTTGC ACGCGGCGAA AACGACGGGG ATGCCGGTGT TCATCATCGG TCACGTCACG AAATCCGGCG ACATAGCGGG TCCGCGCGTG TTGGAGCACA TCGTCGACGT CGTGCTTTAC TTGGAGGGCG ACGCCGATCG AGCCGTGCGC ATCTTGCGCG GGCACAAGAA TCGCTACGGC TCCACGGACG AAGTCGGGGT GTTTCAAATG AGCGACGGGG GCATGAAACC TGTGGCGTCG CCGTCGGCGC TCTTCCTCGG CGAACGCATC TTGAGCCCAG ACGTCTCCGC GGCGCCGACG GTGACGGTGC AAGGCTCGCG ACCGTTCATG CTCGAAGTCC AAGCGCTCAC GAACGAGCGC GCGGATGCGG GCGAAGGTGG TGGAATGAGC GCGCCGCCGA TTCGCACCGC CGTCGGTCTG CGATTCGAAC GCATGCAACT CTTGCTCGCC GTGCTCGCGA AATTCGTCCT CGGTCGACGC CTGCAAAAGC ACGACGTCTT CATCAACATC GTGGGTGGTA TGAAGCTCGA AGATCCATCC ACGGATGTCG CCGTCGCGCT GGCGATCGCG AGTAGTTTCG TCGAGAAACC GCTTCCGCCA GATATGTGCT TCTTCGGCGA AGTCGGCTTG GGCGGCGAGT TGCGACCGGT GATGCAAGCC GAGCGTCGCA TCGCCGAGGC GGCGACGATG GGGTTCAAGC GCGTGCTCTT GCCCGAGGCT GGAAGCTCGC CAGAGATGGG TAAAAAGACT GGCATCGAAC TCGTGCGGTG CAACACGCTC GCGGACGCGT TGGAGGCGGC GTTG
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Protein sequence | SQTKTAYVCA ECGEDSRQWL GQCPACKSWD TMKAIALAPT SGGGAGKASA GGGAGARARQ TMPRMRLREE LGKEIERVLG GGVVPGGMIL VGGDPGVGKS TILLQLAGLL GARGEEREGE EDGANESIAA GGVLYASGEE SVEQVAGRAE RMGIDPNGIY LYSATRLENI LEAVSTLKPA ALVVDSIQTV FLEDATGSPG SVSQVRECAT ALLHAAKTTG MPVFIIGHVT KSGDIAGPRV LEHIVDVVLY LEGDADRAVR ILRGHKNRYG STDEVGVFQM SDGGMKPVAS PSALFLGERI LSPDVSAAPT VTVQGSRPFM LEVQALTNER ADAGEGGGMS APPIRTAVGL RFERMQLLLA VLAKFVLGRR LQKHDVFINI VGGMKLEDPS TDVAVALAIA SSFVEKPLPP DMCFFGEVGL GGELRPVMQA ERRIAEAATM GFKRVLLPEA GSSPEMGKKT GIELVRCNTL ADALEAAL
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