Gene OSTLU_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_3270 
Symbol 
ID5006464 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009373 
Strand
Start bp142857 
End bp144440 
Gene Length1584 bp 
Protein Length478 aa 
Translation table 
GC content66% 
IMG OID640421885 
Productpredicted protein 
Protein accessionXP_001422446 
Protein GI145356453 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.37953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCGCAGACGA AGACGGCGTA CGTGTGCGCC GAGTGCGGCG AGGACTCGCG GCAGTGGCTG 
GGACAGTGCC CGGCGTGCAA GAGCTGGGAC ACGATGAAGG CGATCGCGCT GGCGCCGACC
TCGGGAGGCG GCGCGGGGAA GGCGAGCGCG GGCGGCGGGG CGGGCGCGCG AGCGGTGGCG
CGGATGGCGG AGAACGCGAC GACGCGCGGG AACGCGAACG GGCGAGGACG CGCGAGCGAC
GGCGCGCGAG CGCTCGGGTG GGTCGCGGAG ACGAGCGCGC CGCGAGCGCT CGGGGACGTG
CTGAGGCCGC GAGCGAACGG GGAGAGGCAA ACGATGCCGA GGATGCGGTT GAGAGAGGAA
TTGGGGAAGG AGATCGAGCG GGTGTTAGGC GGGGGAGTGG TTCCGGGCGG GATGATTCTC
GTCGGTGGCG ATCCGGGGGT GGGGAAGTCG ACGATTTTGT TACAGCTCGC GGGACTTCTG
GGCGCGCGAG GCGAGGAACG AGAGGGCGAA GAAGACGGCG CGAACGAATC GATCGCCGCG
GGAGGCGTGC TTTACGCGTC TGGCGAAGAG TCCGTGGAGC AAGTCGCCGG ACGCGCCGAG
CGCATGGGGA TTGATCCGAA CGGGATTTAT TTATACAGCG CAACGCGCCT GGAAAATATT
CTCGAGGCGG TGTCGACGCT CAAGCCCGCG GCGCTCGTGG TGGATTCCAT TCAAACCGTG
TTCTTGGAAG ACGCCACGGG AAGCCCGGGA AGCGTGTCTC AGGTGCGCGA GTGCGCCACC
GCGCTGTTGC ACGCGGCGAA AACGACGGGG ATGCCGGTGT TCATCATCGG TCACGTCACG
AAATCCGGCG ACATAGCGGG TCCGCGCGTG TTGGAGCACA TCGTCGACGT CGTGCTTTAC
TTGGAGGGCG ACGCCGATCG AGCCGTGCGC ATCTTGCGCG GGCACAAGAA TCGCTACGGC
TCCACGGACG AAGTCGGGGT GTTTCAAATG AGCGACGGGG GCATGAAACC TGTGGCGTCG
CCGTCGGCGC TCTTCCTCGG CGAACGCATC TTGAGCCCAG ACGTCTCCGC GGCGCCGACG
GTGACGGTGC AAGGCTCGCG ACCGTTCATG CTCGAAGTCC AAGCGCTCAC GAACGAGCGC
GCGGATGCGG GCGAAGGTGG TGGAATGAGC GCGCCGCCGA TTCGCACCGC CGTCGGTCTG
CGATTCGAAC GCATGCAACT CTTGCTCGCC GTGCTCGCGA AATTCGTCCT CGGTCGACGC
CTGCAAAAGC ACGACGTCTT CATCAACATC GTGGGTGGTA TGAAGCTCGA AGATCCATCC
ACGGATGTCG CCGTCGCGCT GGCGATCGCG AGTAGTTTCG TCGAGAAACC GCTTCCGCCA
GATATGTGCT TCTTCGGCGA AGTCGGCTTG GGCGGCGAGT TGCGACCGGT GATGCAAGCC
GAGCGTCGCA TCGCCGAGGC GGCGACGATG GGGTTCAAGC GCGTGCTCTT GCCCGAGGCT
GGAAGCTCGC CAGAGATGGG TAAAAAGACT GGCATCGAAC TCGTGCGGTG CAACACGCTC
GCGGACGCGT TGGAGGCGGC GTTG
 
Protein sequence
SQTKTAYVCA ECGEDSRQWL GQCPACKSWD TMKAIALAPT SGGGAGKASA GGGAGARARQ 
TMPRMRLREE LGKEIERVLG GGVVPGGMIL VGGDPGVGKS TILLQLAGLL GARGEEREGE
EDGANESIAA GGVLYASGEE SVEQVAGRAE RMGIDPNGIY LYSATRLENI LEAVSTLKPA
ALVVDSIQTV FLEDATGSPG SVSQVRECAT ALLHAAKTTG MPVFIIGHVT KSGDIAGPRV
LEHIVDVVLY LEGDADRAVR ILRGHKNRYG STDEVGVFQM SDGGMKPVAS PSALFLGERI
LSPDVSAAPT VTVQGSRPFM LEVQALTNER ADAGEGGGMS APPIRTAVGL RFERMQLLLA
VLAKFVLGRR LQKHDVFINI VGGMKLEDPS TDVAVALAIA SSFVEKPLPP DMCFFGEVGL
GGELRPVMQA ERRIAEAATM GFKRVLLPEA GSSPEMGKKT GIELVRCNTL ADALEAAL