Gene OSTLU_28563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28563 
Symbol 
ID5006441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009373 
Strand
Start bp81053 
End bp82867 
Gene Length1815 bp 
Protein Length604 aa 
Translation table 
GC content62% 
IMG OID640421862 
ProductMFS family transporter: sugar 
Protein accessionXP_001422383 
Protein GI145356325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.000293154 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00000500357 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGCGA ATGGCTACGC GCGCAACGCC TCGGTCGAGC TGTACTGCTT CTGCGTCGTC 
GCTCTGGGTC TGATCCTGTA CGGCTACCCG GTGGGTGTTA CGAACGTCAT GCTCACCTCG
CCCGCGCAAT TCCAGCGCGA CGCCGGATTC GAGGGCGACG TCGAGACGCT GGGAATGCTG
GTCAGCGCCA ACAGCGCCGG CGCGCTGATC GGGTGCGCGC TGACGCTGGT GCCGACGCGC
GGCGTCGCGG CGGCGGACGC GCTGGGACGA GTGGCGCTCG TCAAACTCGG CGCGGGATGT
TACGCCGCGG CGTCGCTCGC CATGGCGCTC ACGCCGATGA AATTGAACGA AATATTCGGC
AGTCGCGCGG TGATACGTTG GTTCGCGGCG TGCCGGTTGT TGTACGGGAT CGGGATGACG
CTGACGTACG GCGGCGCGGC GGTGTACGTG GCGGAGTTGA TGTCGCAGCA AACGCGCGGG
TATTACTTGC CGATGATGAG CGTGATGACG ATGACGGGGG ATTTGCTCGG GAATTTCGTG
GGGATGCCGT TGGAGCGCGC GGCGGGAGGA TGGCGCGTGC TCGCGGCGTT GCCGGTGCCG
GTGGCGTTGG GGTTTTACGC GTACGCGCGC AAGCTGCCGG ATTCGCCGCG GTGGGAAGTG
TTGAACGCGA CGAACGCGGC GCAGCGCGAG GGAGAGGCGA GAAGGAGGGC GGCGGCGGAG
AAGAAACGCG GAAAGCGTGG GTTGTTTGGA CGCGGCCGCG ATTCGAACGC GCCGTCGGAT
TCGGAGAGCG AGAACGAACC GTCGTGGACC GCGCGAGACG TCGACTTGAC GGCGGCGCGG
CGGTCGCTGG GGATTTTACG AAATGAATCC GCCAAGGCGT CTTTTTCCGT CACCGACGCG
TGCGTACGTC GATCGAGATC CGGCGGCGCG GGAGGTTTGC TCGCGCCGCC CAACCCCGAC
GCGCAGAGTA AACAAATGAA GAAGGAGATT GAACAGGAGC TCGCGGAAAT CATCGACGTC
GTAAAAACTG GTTCGAAGAA CGGGCGCGAT TGCGCTTCGG CGGTGAACAC CGACGCGAGT
AAGCGCGCGA TGACCGTGGC GTTTGGTTTA TCCATCATGT CGATGTTGAG CGGCGTTCCG
GCGATGAGTT ACTTCACCAA ACACATCTTC GAGATGACGG GGCACACGCC CACGGCGGCG
AGCGGGATGA CGACGGCGCT TGCCTTGTGC AAGCTCATCG TCACAATCTT CGTCGCGATG
TCCCTTGAAA CTTTTGGACG ACGACGAATG CTACTCATCG GTATATCCAT TCAGGGCGTC
GCGATGACGC TCTTGGCGTT TCTCTTCGAC GGCGTCACGT GGATCGAGGA CCCGCGACAC
GCCGTGTCGT TTCAGCTCTT GAACGGATCC ATCGCACAAG TCGCCGACGT CGCGATTTTC
GTCAACGCCG TCGGGTTTCA TCTCAGTTTT TGGGCACTCG CGTGGACGGT GGCGAACGAA
TTGAGCCCGC TGCGCACGCG AGCCACCATC ATGGCCATCA ACTCGATGTT TTCCTGGACG
CTCAGCACGG TGACGGTTCG CTTCCTCCCG GTGATGATGA AATCTCCGGG AATTTCCGCC
ACCTTTGGCT TTTGCGCCGT CAACCTCTAT GCGACGATCA TTTTCGTCTA CTTGTACGTC
CCGGAAACCA AAGGACGGAC GCTCGAAGAG CTGGAAATCG TCATGACCAA GTCTTCGAGC
CTTCGCGACG TCGTGCGTCG CTTGAATCGA CCCGACGAAG ACGACGATTT GAAACCGCTC
GCCGGCGCGC TTTGA
 
Protein sequence
MHANGYARNA SVELYCFCVV ALGLILYGYP VGVTNVMLTS PAQFQRDAGF EGDVETLGML 
VSANSAGALI GCALTLVPTR GVAAADALGR VALVKLGAGC YAAASLAMAL TPMKLNEIFG
SRAVIRWFAA CRLLYGIGMT LTYGGAAVYV AELMSQQTRG YYLPMMSVMT MTGDLLGNFV
GMPLERAAGG WRVLAALPVP VALGFYAYAR KLPDSPRWEV LNATNAAQRE GEARRRAAAE
KKRGKRGLFG RGRDSNAPSD SESENEPSWT ARDVDLTAAR RSLGILRNES AKASFSVTDA
CVRRSRSGGA GGLLAPPNPD AQSKQMKKEI EQELAEIIDV VKTGSKNGRD CASAVNTDAS
KRAMTVAFGL SIMSMLSGVP AMSYFTKHIF EMTGHTPTAA SGMTTALALC KLIVTIFVAM
SLETFGRRRM LLIGISIQGV AMTLLAFLFD GVTWIEDPRH AVSFQLLNGS IAQVADVAIF
VNAVGFHLSF WALAWTVANE LSPLRTRATI MAINSMFSWT LSTVTVRFLP VMMKSPGISA
TFGFCAVNLY ATIIFVYLYV PETKGRTLEE LEIVMTKSSS LRDVVRRLNR PDEDDDLKPL
AGAL