Gene OSTLU_28553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28553 
SymbolPAFB3501 
ID5006438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009373 
Strand
Start bp63703 
End bp64876 
Gene Length1174 bp 
Protein Length368 aa 
Translation table 
GC content63% 
IMG OID640421859 
Productpredicted protein 
Protein accessionXP_001422426 
Protein GI145356413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.353126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000000290472 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TCGCGCCTCG GAGCGTCGCT CGCGCGGTTT CGCTCGTCGT CATGGCGGAC GTGGATTTGG 
TGAAGAACAT TTTTGGTTCC GACAGCGAAG ACGACGACGA CGGAGACCGC GTCGCGACGG
AATCGCTCGA AAACCGCGAC GATCGCGGGC GCGAATCCAC GTTTAAATCG TCTTTAGAGC
TCCCGGACGA CGCGGAAAAC GACGAGGACG ACCCGGCGAC GCGAGCGAAG GGCGAACCGT
TGCGATTAGA GCTGCCGAGC GCCGAAGCGG GGCGCGAGAC GATCGAGGAC GAGACGAAGA
TTGCGAAATT GAGCAACATC TTCGGCGCCG AGCCCAAACC CTTCGACGCG GCGACGCATC
GAGACGACGG CGAACGCGAG GAATTCGTCG ACGTCGACGG CGTCACGCGC ATCAGGACCT
CGAACGAGAA CACGGTGCGA TGGAGGATGA ATGAAAGCAC GGGTGAGGCG GAGAGTAACG
CGTATTACGT GCGATGGGAC GATGGAACGA CGCATTTGGT CGTCGGCGAC GAGTACCTGC
GATGCGACGA ACGGGCGGTG GCGGACGCGG ATTCGTTCTT GTACGTGCGG AAACAAGGGT
TGATGAAGGC GCAGCGACGG TTGACGACAA AGATGACGTT TAATCCCGCG ACGTTGGACT
CGCGGACGCA CAAGAGGTTG ACGGCGGCGA TCGATAAGAA GCACGGATCG AGGGCGACGC
GGACGATGGC GTACGTGTCG CGCGTCGATC CGGAGCGAGA GAAGGAGGCG TTGGACGCGG
AGCTAGAGCG CGCGGCGAGG GAGAGCGCGG CGTTGGAGAG GAAACAGGCG AAGATGATGC
GGGAAGACCG CGAGCGGACG GGGATGTGGT CGGCGGGGGG GAGAAACGAT CGCGGGTACA
CGGAGTCGTA TTACGAACGA CGCGACGACG CCGGCGGCGA CGTCGACGCG GAAGGGGGCG
CGGCGCGGAT GGACGCCGAT TTCTTAGAGG CCGAGGAGAA CGATGGTGCG GCCGGTAGCG
ATGGTGCGGG CGCGATGGAA CAGGACGTCG CCGCGGGCTC GTTGGACGAA GACGAAGACG
AAGCCGTCGG CGCGCCCAAG GAGCGAAAGA AACGCGCGTT GGTCGTGGAC GACGAGGAGG
ACGAATGAGA ACGAATGATT TGTGATAAAA CCTA
 
Protein sequence
MADVDLVKNI FGSDSEDDDD GDRVATESLE NRDDRGREST FKSSLELPDD AENDEDDPAT 
RAKGEPLRLE LPSAEAGRET IEDETKIAKL SNIFGAEPKP FDAATHRDDG EREEFVDVDG
VTRIRTSNEN TVRWRMNEST GEAESNAYYV RWDDGTTHLV VGDEYLRCDE RAVADADSFL
YVRKQGLMKA QRRLTTKMTF NPATLDSRTH KRLTAAIDKK HGSRATRTMA YVSRVDPERE
KEALDAELER AARESAALER KQAKMMREDR ERTGMWSAGG RNDRGYTESY YERRDDAGGD
VDAEGGAARM DADFLEAEEN DGAAGSDGAG AMEQDVAAGS LDEDEDEAVG APKERKKRAL
VVDDEEDE