Gene OSTLU_28552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28552 
Symbol 
ID5006437 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009373 
Strand
Start bp62673 
End bp63646 
Gene Length974 bp 
Protein Length306 aa 
Translation table 
GC content66% 
IMG OID640421858 
Productpredicted protein 
Protein accessionXP_001422379 
Protein GI145356317 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value0.177666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000000277252 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCCGA GCGGTCGACT TTTGCGCGCC TTCAAGGGGT GGTTGGACAC GCGCGCCGTC 
GTGCGCGTCG CCGGCGCGGA CGCCGCGGCG TTTCTGCAGG TGCGCTCGAT GTTTACGTAT
CGCCATCGTT TCAAAACTGA CGCGACGACC AGGGCGCGGT GACGAACGAC GTGCGCGCGC
TGCGCGAGGG CGGCGACGCG GCGTACTGCG CGACGCTCAC GCCGAAGGGA AAAATCTTCG
CCGACGCGTT CGTTCGACTC GCCGGGAGCG AATCGGATGA ATTTTTATTG GACGTCGATC
GAGAAAAGTC GAGCGAATTT TTGCGCGCGC TCAGGATGCT GAGCCTGAGG AAACGGGTGA
CGATCGAGGA CGCGAACGAG CATCGCGTCG TCGTCGCGAG CGCGGACGCG GACGTCGGGG
ATTCGAGCGC GCGCGCGGTG CGGAGGGACG AGCGATTGGA ACAATTAGGG TTTAGGGGTA
TAGTGCCCGC GTCCGACGCG GCGTGGCGCG ACGCGGTGGC GGACGCGCAC GCGCGAACGC
GAATCGCGCT CGGCGTCGCC GAGGGCGCGA GCGAGCTCGC GAACGCGTTA CCGCTCGAGT
GCAATTTCGA CGCTTTGAAC GGCGTGAGTT TCACCAAAGG GTGCTACGTC GGGCAAGAGA
ACACGGCGAG GCAGCGGTTT CGAGGGGTCG TGCGCAAGCG CATCGCGCCT TTCGTTGCGA
TCGAACCCGG CGCGCGCGCG CCGAGCGTCG GGGGAAAAAT CGTAAACGAA CGCGGCGACG
TCGTGGGTGA TGTCATCGCG GCGATCGAAG ACGAGGACGC GGTCTTGGGT TTGGTGCGCG
CGCGCATGAG TTTCATTCGC GCGCACGTTG CGGGCGAACC AGGGTCGGCG TTTCGAATCG
CCGACGGCGC GCGCGTCGGC GTCGAGCCCC CGAGTTGGTG GCCGACCGAG TGGCTCGACG
CCGCCGAGGA GTGA
 
Protein sequence
MRPSGRLLRA FKGWLDTRAV VRVAGADAAA FLQGAVTNDV RALREGGDAA YCATLTPKGK 
IFADAFVRLA GSESDEFLLD VDREKSSEFL RALRMLSLRK RVTIEDANEH RVVVASADAD
VGDSSARAVR RDERLEQLGF RGIVPASDAA WRDAVADAHA RTRIALGVAE GASELANALP
LECNFDALNG VSFTKGCYVG QENTARQRFR GVVRKRIAPF VAIEPGARAP SVGGKIVNER
GDVVGDVIAA IEDEDAVLGL VRARMSFIRA HVAGEPGSAF RIADGARVGV EPPSWWPTEW
LDAAEE