Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28552 |
Symbol | |
ID | 5006437 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009373 |
Strand | + |
Start bp | 62673 |
End bp | 63646 |
Gene Length | 974 bp |
Protein Length | 306 aa |
Translation table | |
GC content | 66% |
IMG OID | 640421858 |
Product | predicted protein |
Protein accession | XP_001422379 |
Protein GI | 145356317 |
COG category | [R] General function prediction only |
COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 0.177666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000000277252 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCCGA GCGGTCGACT TTTGCGCGCC TTCAAGGGGT GGTTGGACAC GCGCGCCGTC GTGCGCGTCG CCGGCGCGGA CGCCGCGGCG TTTCTGCAGG TGCGCTCGAT GTTTACGTAT CGCCATCGTT TCAAAACTGA CGCGACGACC AGGGCGCGGT GACGAACGAC GTGCGCGCGC TGCGCGAGGG CGGCGACGCG GCGTACTGCG CGACGCTCAC GCCGAAGGGA AAAATCTTCG CCGACGCGTT CGTTCGACTC GCCGGGAGCG AATCGGATGA ATTTTTATTG GACGTCGATC GAGAAAAGTC GAGCGAATTT TTGCGCGCGC TCAGGATGCT GAGCCTGAGG AAACGGGTGA CGATCGAGGA CGCGAACGAG CATCGCGTCG TCGTCGCGAG CGCGGACGCG GACGTCGGGG ATTCGAGCGC GCGCGCGGTG CGGAGGGACG AGCGATTGGA ACAATTAGGG TTTAGGGGTA TAGTGCCCGC GTCCGACGCG GCGTGGCGCG ACGCGGTGGC GGACGCGCAC GCGCGAACGC GAATCGCGCT CGGCGTCGCC GAGGGCGCGA GCGAGCTCGC GAACGCGTTA CCGCTCGAGT GCAATTTCGA CGCTTTGAAC GGCGTGAGTT TCACCAAAGG GTGCTACGTC GGGCAAGAGA ACACGGCGAG GCAGCGGTTT CGAGGGGTCG TGCGCAAGCG CATCGCGCCT TTCGTTGCGA TCGAACCCGG CGCGCGCGCG CCGAGCGTCG GGGGAAAAAT CGTAAACGAA CGCGGCGACG TCGTGGGTGA TGTCATCGCG GCGATCGAAG ACGAGGACGC GGTCTTGGGT TTGGTGCGCG CGCGCATGAG TTTCATTCGC GCGCACGTTG CGGGCGAACC AGGGTCGGCG TTTCGAATCG CCGACGGCGC GCGCGTCGGC GTCGAGCCCC CGAGTTGGTG GCCGACCGAG TGGCTCGACG CCGCCGAGGA GTGA
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Protein sequence | MRPSGRLLRA FKGWLDTRAV VRVAGADAAA FLQGAVTNDV RALREGGDAA YCATLTPKGK IFADAFVRLA GSESDEFLLD VDREKSSEFL RALRMLSLRK RVTIEDANEH RVVVASADAD VGDSSARAVR RDERLEQLGF RGIVPASDAA WRDAVADAHA RTRIALGVAE GASELANALP LECNFDALNG VSFTKGCYVG QENTARQRFR GVVRKRIAPF VAIEPGARAP SVGGKIVNER GDVVGDVIAA IEDEDAVLGL VRARMSFIRA HVAGEPGSAF RIADGARVGV EPPSWWPTEW LDAAEE
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