Gene OSTLU_28539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28539 
Symbol 
ID5006478 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009373 
Strand
Start bp44316 
End bp44901 
Gene Length586 bp 
Protein Length158 aa 
Translation table 
GC content70% 
IMG OID640421899 
Productpredicted protein 
Protein accessionXP_001422421 
Protein GI145356403 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000000139364 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTGCCGA CGTGCCGAGA TTTCATGACC CCCGCGCGCG CGTGCGTGCG CGAGGCGACG 
ACGCGCGACG CGGCGACGCG CGAGACGACG AGGCGACGGC GCGCGCGAGG ACGTTCGACT
GAACCGCGCG CGCGCGTTTC GCTCGCGCAG GTGCATCACG GCGACGACGG ACGATACGAT
CGAGAGCGTC GTACACGCGC TGGCCTACGA CGGCGTCGGG TGCGTGTGCG TGCTCGACGC
CGGGAAACCG GTCGGCGTCG TCACCAAGGC GGACGCGCTG GAGTGGTGGC TCGAAAAGCT
TCCCATGGAC TGCGCGTGCG GCGCGGTGGC GAACAAGGCG GTGATTCAGG CGAGTCCGTG
GATGACGCGC GATGAGGTGA GCGCCGTGCT GATGCGCAAT CGCGTGCACC ACGTCGCCGT
CACCGACCGA GACGGCGTCT TCGTCGGCCT CGTCTCGGCG TGGGACATCG CTCGCGAGGT
CGGTCGCGCG TACGAGCTCC CGTTTTGGCA AGAATTCTTC GAGCGCGTCC GACAGCCGCG
CTTACGAGGC TCGCGTCCGA CGCGATCGAG CGCGCCCGCC GCGTGA
 
Protein sequence
MVPTCRDFMT PARACITATT DDTIESVVHA LAYDGVGCVC VLDAGKPVGV VTKADALEWW 
LEKLPMDCAC GAVANKAVIQ ASPWMTRDEV SAVLMRNRVH HVAVTDRDGV FVGLVSAWDI
AREVGRAYEL PFWQEFFERV RQPRLRGSRP TRSSAPAA