| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28523 |
|---|
| Symbol | |
|---|
| ID | 5006470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009373 |
|---|
| Strand | + |
|---|
| Start bp | 12208 |
|---|
| End bp | 13848 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640421891 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422363 |
|---|
| Protein GI | 145356284 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CACTCCGCGA CGCCTCGCGC GTACGCACGG CGCCGCACGA CCCCTCGAAT CGCGACGCGC
GCGATCGCGA TGTTCGCCGC GACGACGACG CTCGGCGCGA CGAAATTCGT CGTCGCGAAA
ACCTCGACGT CGACCTCGTC GCGCGCGCGA CGATCGACGC CGCGCGTTCG CGCGCAGAGC
GTCCAGGCGC CGGCGCTGAA CACGACGCGA TCGAGCGAGA TCTTCAAGGC GGCGCAAGAC
ATCCTGCCGG GAGGCGTGAA CTCGCCCGTG CGCGCGTTCA AGTCGGTGGG CGGGAACCCG
ATCGTGTTCG AGCGCGTCAA GGATGCGTAC GCGTTCGACG TGGACGGGAA CAAATACGTC
GATTACGTCG GATCGTGGGG ACCGGCGATC TGCGGACACG CGAATGATCG GGTGAACGAG
AAATTGAAGG CGCAGATCGA TAAGGGGACG AGCTTCGGGG CGCCGTGTGA GCTCGAGAAC
GCGCTCGGCG AGATGGTCAT CGAGCGCGTG CCGAGCGTGG AGATGGTGCG ATTTTGCAAC
TCTGGGACGG AGGCGTGCTT GTCCGCGCTG CGCGTGATGC GGGCGTACAC GGGGAGAGAC
ATGATCATTA AGTTCGAAGG GTGCTACCAC GGACACGCCG ACCCGTTCTT GGTCAAGGCT
GGTTCGGGCG TCATCACGCT CGGGTTGCCG GATTCGCCGG GCGTGCCGGC GGCGGCGACG
GCGACGACGC TGTGCGCGAC GTACAACAAC CTCGATGAAG TCAAGGCTTT GTTCGCGGCG
AACCCGGGTA AGATTGCGGG GGTGATCCTC GAACCCGTGG TCGGGAACAG CGGTTTCATC
GCCCCGGACA AGGAGTTTTT GCAAGGCTTG CGCGAGACGT GCACCAAGGA GGGCGCGGTG
CTGTGCTTTG ACGAAGTCAT GACTGGGTTC CGCATCGCCA AGGGCTGCGC GCAAGAGTAC
TGGGGCGTCA CCCCGGATTT GACCACCATG GGTAAGGTGA TCGGCGGCGG TATGCCCGTC
GGCGCGTACG GGGGTAAGCG CGAAATCATG GACATGGTCG CCCCGGCGGG TCCGATGTAC
CAAGCCGGTA CGCTCTCCGG GAACCCGCTC GCCATGGTTG CTGGCATCGA AACGTTGAAG
ATTCTCGGCG AACCGGGTCA GTACGAAAAG TTGGACAAGC TCACCAAGCG CTTGATCGAG
GGCATCTTGA AGGCGGGTAA GGACAACGGC CACGCGGTGT GCGGCGGTCA CATCTCGGGC
ATGTTTGGTT TCTTCTTCAC CGAAGGTCCG GTGAAGAACT TCGCCGACGC GGCGAAGAGC
GACACCGAAA AGTTCGGTCG CTGGCACCGT GCCATGCTCG AAGAAGGTGT CTACTTGGCC
CCGTCCCAAT ACGAAGCCGG TTTCATGTCT TTGGCGCACA CCGAAGCGGA CATTGACGCC
ACCATCGCCG CCGCTCAACG CGCGATGGCG CGCATTTAAA CGCATATTTT GACGATTTCG
ATGACGCGGT GACGCGTCTT CGTAGTCATC AACATTTACC ACGACGACGA CGGCGCAGTC
AGCGCACGCA CGGCGACGAT CGACGACGAT TACTTTGATT AACTTGCTCT CATTGAAATT
TAACAACTCT TCAAGCCGAT T
|
|---|
| Protein sequence | MFAATTTLGA TKFVVAKTST STSSRARRST PRVRAQSVQA PALNTTRSSE IFKAAQDILP
GGVNSPVRAF KSVGGNPIVF ERVKDAYAFD VDGNKYVDYV GSWGPAICGH ANDRVNEKLK
AQIDKGTSFG APCELENALG EMVIERVPSV EMVRFCNSGT EACLSALRVM RAYTGRDMII
KFEGCYHGHA DPFLVKAGSG VITLGLPDSP GVPAAATATT LCATYNNLDE VKALFAANPG
KIAGVILEPV VGNSGFIAPD KEFLQGLRET CTKEGAVLCF DEVMTGFRIA KGCAQEYWGV
TPDLTTMGKV IGGGMPVGAY GGKREIMDMV APAGPMYQAG TLSGNPLAMV AGIETLKILG
EPGQYEKLDK LTKRLIEGIL KAGKDNGHAV CGGHISGMFG FFFTEGPVKN FADAAKSDTE
KFGRWHRAML EEGVYLAPSQ YEAGFMSLAH TEADIDATIA AAQRAMARI
|
|---|
| |