Gene OSTLU_33739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_33739 
Symbol 
ID5006388 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009372 
Strand
Start bp66007 
End bp68574 
Gene Length2568 bp 
Protein Length331 aa 
Translation table 
GC content50% 
IMG OID640421809 
Productpredicted protein 
Protein accessionXP_001422294 
Protein GI145356136 
COG category 
COG ID 
TIGRFAM ID[TIGR02167] bacterial surface protein 26-residue repeat 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.39925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000589113 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGATT GGGACACGGG CAATGTCACG AACATGGGTA GTGCATTTTC GTCTAAATAC 
TACTTCAATG CATCCATCGG GAACTGGAAC ACGTCGCGAG TGACGTATAT GGGTTCCATG
TTTCAGTCTG CGTATTCGTT TAATCAGGAC ATCGGGAACT GGAACACGTC GCAGGTGACG
AACATGTATT CCATGTTTCA GTCTGCGAAT TCGTTTAATC AGGACATCGG GAACTGGAAC
ACGGCGCGAG TGACGTATAT GGGTTCCATG TTTCAGTATG CATCTTCGTT TGATCAGGAC
ATCGGGGGCT GGAACACGTC GCAGGTGACG AACATGTATT CCATGTTTCA GTATGCGTCT
TCGTTTGATC AGGATATCGG GAACTGGAAC ACGTCGCGAG TGACGTATAT GTATTCCATG
TTTCAGGGCG CATCTGCGTT TGATCAGGAC ATCGGGGGCT GGAACACGTC GCGAGTGACC
AATATGGGTT CCATGTTTCA GTATGCATCT TCGTTTGATC AGGACATCAC AAACTGGAAC
ACGTCGCGAG TGACCAATAT GGGTTCCATG TTTCAGTATG CATCTTCGTT TGATCAGGAC
ATCACAAACT GGAACACGGC GCGAGTAACG TACATGACCA ACATTTTCCA AAACGCGACG
GCGTTTCAGG CGAAATATAC ATGTTCGACC GTTCAATCTG GACCCATCGC ATCGTGTTCG
CAGTGCGTTG CAAACTGTGC CGCTTGTAGT AACACTGCGT CGGGTGTTTG TAGTGTTTGC
ATGACTGGGT ACACATTAGA CGGAGGAATG TGTGCGGCAC CCGCTGCGGC GCTCACCGAC
GCAACGTTTT CTACTGCGAT CGCTAGTTGC CTCGAGGAGG CAGCGTCGGA TGGCCTGTGT
ACTTCTTACG GCTTTGCAAG TGGGTTCGGA GCGATGCCTG ATTGGGACAC GGGCAATGTC
ACGAACATGG GTAGTGCATT TTCGTCTAAA TACTACTTCA ATGCATCCAT CGGGAACTGG
AACACGTCGC GAGTGACGTA TATGGGTTCC ATGTTTCAGT CTGCGTATTC GTTTAATCAG
GACATCGGGA ACTGGAACAC GTCGCAGGTG ACGAACATGT ATTCCATGTT TCAGTCTGCG
AATTCGTTTA ATCAGGACAT CGGGAACTGG AACACGGCGC GAGTGACGTA TATGGGTTCC
ATGTTTCAGT ATGCATCTTC GTTTGATCAG GACATCGGGG GCTGGAACAC GTCGCAGGTG
ACGAACATGT ATTCCATGTT TCAGTATGCG TCTTCGTTTG ATCAGGATAT CGGGAACTGG
AACACGTCGC GAGTGACGTA TATGTATTCC ATGTTTCAGG GCGCATCTGC GTTTGATCAG
GACATCGGGG GCTGGAACAC GTCGCGAGTG ACCAATATGG GTTCCATGTT TCAGTATGCA
TCTTCGTTTG ATCAGGACAT CACAAACTGG AACACGTCGC GAGTGACCAA TATGGGTTCC
ATGTTTCAGT ATGCATCTTC GTTTGATCAG GACATCACAA ACTGGAACAC GGCGCGAGTA
ACGTACATGA CCAACATTTT CCAAAACGCG ACGGCGTTTC AGGCGAAATA TACATGTTCG
ACCGTTCAAT CTGGACCCAT CGCATCGTGT CGATCGGGGT CACCATTTCA GAATTCGACC
GAGTTGAAGC TTGCGGTCGA CAGCTGTTTA CTCGCGGATC CAACAGGAAA TTGTGATTGC
AGAAGTTCTC TGGTCGACTG CCGGGCGGCG AGCGGCGATT CAATATCGAA ATGGGATACA
CGCTTCGTAA CGAATATGAG CTCCTTGTTT GCAGGATCAG ATCAATTTAA CGCAGATTTA
GGTGCTTGGA ACACAAGTGC CGTTACTTCG ATGTCGCACA TGTTTCATGG AGCCGCTGCG
TTCAACAAAG ACATTAGTGG TACGTATAAT GCGAATATCT TCGCGTGGGA CGTGAGCGGC
GTGACGGACA TGACTCGAAT GTTCGAAGGC GCTAATAGTT TCGCTCAGGA CATCAGCTCG
TGGAACGTGG TGAACGTCGC GAGCATGGAC AGTATGTTTT CGGGCGCAAA CGCGTTCAAC
GCGCCCATCG GCAGTTGGAA CACAGACGGC GTGACAAACA TGTTTCAGAT GTTCCACTCA
GCACATGTGT TCGATCAACC AATCGGAAGC TGGAACACGG AACGGGTGAC GAGCATGCAG
TGCATGTTCA TGTATGCGCG TGAATTCAAT CAGGATATCA GCTCCTGGAA CACGGTCAAC
GTGGTAAATA TGTGGGATAT GTTTAATAGT GCGGATGCGT TCAACCAGAA CATTGGGTTA
TGGAACACAG AGGAGGTGAC GGATATGAGA TACATGTTCT ATAACGCGGG TGCGTTCAAC
CAGCCCATAG GGTCGTGGAA CACCGCCAAT GTCACGACCA TGCGATCTAT GTTTCAGGGC
GCATCTGCGT TTAATCAGGA CATCGGAAAC TGGAACACGA CTTCTGTCAC GGACATGTAC
AGCATGTTTG GTAGCGCGAC GGCGTTCAAT CAGAACATCA CGGGATGG
 
Protein sequence
MPDWDTGNVT NMGSAFSSKY YFNASIGNWN TSRVTYMGSM FQSAYSFNQD IGNWNTSQVT 
NMYSMFQSAN SFNQDIGNWN TARVTYMGSM FQYASSFDQD IGGWNTSQVT NMYSMFQYAS
SFDQDIGNWN TSRVTYMYSM FQGASAFDQD IGGWNTSRVT NMGSMFQYAS SFDQDITNWN
TSRVTNMYSM FQYASSFDQD IGNWNTSRVT YMYSMFQGAS AFDQDIGGWN TSRVTNMGSM
FQYASSFDQD ITNWNTSRVT NMGSIYMFYN AGAFNQPIGS WNTANVTTMR SMFQGASAFN
QDIGNWNTTS VTDMYSMFGS ATAFNQNITG W