Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28493 |
Symbol | |
ID | 5006406 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009372 |
Strand | - |
Start bp | 123425 |
End bp | 124750 |
Gene Length | 1326 bp |
Protein Length | 360 aa |
Translation table | |
GC content | 56% |
IMG OID | 640421827 |
Product | predicted protein |
Protein accession | XP_001422349 |
Protein GI | 145356256 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000203706 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCC TTCTCACCGG TGGCGCCGGC TTCATCGGCT CGCACGTCGC CGAGCGCCTC GCGTCGAGGC ATCCCGAGTA CACGGTGCGC GCACGATTTC GACCCCGTGC GCGTGCGTCG AACAACGCAC GGACTTTGCA CCCATCTCTC GCGCGAACGA CTGACCGCGA ACGACTCGTC GCGCTCGACA GATTGTCATC CTGGACAAGC TCGACTATTG CTCGAGCTTG AAAAATCTCG AGCGCGCGAA AGAATGCGCG AACGTGCGGT TCGTCAAGGG CGATGTGCGT TCGTTCGATT TATTGAGTTA CGTCTTGCAA AGCGAGCGCA TCGACACCGT CATGCACTTC GCCGCGCAGA GTCACGTGGA CAACTCTTTC GGGAACTCGT ACGAGTTCAC GAAGAATAAC ATCGAGGGCA CGCACGCGTT ACTCGAGGCG TGCGTGCGAG CGCAGAAGAC CGAAATTCGA CGATTCCTGC ACGTGTCCAC GGATGAGGTA TACGGGGAAA ATCTCATGGA TTCAAACACC GAGCACGCGT CGCTCCTGAC GCCCACCAAC CCGTACGCCG CGACCAAGGC GGGCGCGGAG ATGCTCGTCA TGGCGTATGG ACGCTCGTAC GGACTACCGT ACATCATCAC TCGCGGAAAC AACGTGTATG GGCCGAATCA GTATCCAGAG AAGGCGATTC CAAAGTTTTC AATCCTCGCG AAACGCGGGG AAAAGATTTC GATACACGGC GACGGCGACG CGACGCGTTC GTACATGCAC GTTGACGATG CGTCTTCGGC GTTCGATGTC ATTCTCCACC GCGGGACGAC GGCGCAGATT TATAACATCG GCTCGCGCGA AGAGCGGACG ATCTTGTCCG TCGCTCGGGA TGTCTGTAAG CTCCTCGATC GCGACCCGGA AACGACCATC GAGCACGTGA GCGATCGAGC CTTCAACGAC CGAAGATATT TCATCGATTG CTCAAAGCTT TTAGCGCTCG GATGGCGACA AGAAAAGTCC TGGGACGTCG GTCTCGCGGA AACCGTGCGT TGGTACTCGA ATAACGACTT GAGCGCCTAC TGGGGCGAAT TCTCACCTGC GTTGCGCCCG CACCCTTCGG CGAGCGCGGA CGGTCGACGA CGATCGCTCG AGTTTGATTT CACAAACGAG CTTGATGATT GCACGACACT GGCTTTGTAA GTGTGAGTGA TTGGAACTCC AGATTGTGGT TCAAATTGGT CCAATCCCGA GTCGACGAAA GTCTTTTTCC AAGTTTTTTT CCAAGAATTA TTTGCGTACA TCATCAGCTT GCACTCGCCT CCCGGTTTGA GAGTCA
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Protein sequence | MRILLTGGAG FIGSHVAERL ASRHPEYTIV ILDKLDYCSS LKNLERAKEC ANVRFVKGDV RSFDLLSYVL QSERIDTVMH FAAQSHVDNS FGNSYEFTKN NIEGTHALLE ACVRAQKTEI RRFLHVSTDE VYGENLMDSN TEHASLLTPT NPYAATKAGA EMLVMAYGRS YGLPYIITRG NNVYGPNQYP EKAIPKFSIL AKRGEKISIH GDGDATRSYM HVDDASSAFD VILHRGTTAQ IYNIGSREER TILSVARDVC KLLDRDPETT IEHVSDRAFN DRRYFIDCSK LLALGWRQEK SWDVGLAETV RWYSNNDLSA YWGEFSPALR PHPSASADGR RRSLEFDFTN ELDDCTTLAL
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