Gene OSTLU_28493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28493 
Symbol 
ID5006406 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009372 
Strand
Start bp123425 
End bp124750 
Gene Length1326 bp 
Protein Length360 aa 
Translation table 
GC content56% 
IMG OID640421827 
Productpredicted protein 
Protein accessionXP_001422349 
Protein GI145356256 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000203706 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TTCTCACCGG TGGCGCCGGC TTCATCGGCT CGCACGTCGC CGAGCGCCTC 
GCGTCGAGGC ATCCCGAGTA CACGGTGCGC GCACGATTTC GACCCCGTGC GCGTGCGTCG
AACAACGCAC GGACTTTGCA CCCATCTCTC GCGCGAACGA CTGACCGCGA ACGACTCGTC
GCGCTCGACA GATTGTCATC CTGGACAAGC TCGACTATTG CTCGAGCTTG AAAAATCTCG
AGCGCGCGAA AGAATGCGCG AACGTGCGGT TCGTCAAGGG CGATGTGCGT TCGTTCGATT
TATTGAGTTA CGTCTTGCAA AGCGAGCGCA TCGACACCGT CATGCACTTC GCCGCGCAGA
GTCACGTGGA CAACTCTTTC GGGAACTCGT ACGAGTTCAC GAAGAATAAC ATCGAGGGCA
CGCACGCGTT ACTCGAGGCG TGCGTGCGAG CGCAGAAGAC CGAAATTCGA CGATTCCTGC
ACGTGTCCAC GGATGAGGTA TACGGGGAAA ATCTCATGGA TTCAAACACC GAGCACGCGT
CGCTCCTGAC GCCCACCAAC CCGTACGCCG CGACCAAGGC GGGCGCGGAG ATGCTCGTCA
TGGCGTATGG ACGCTCGTAC GGACTACCGT ACATCATCAC TCGCGGAAAC AACGTGTATG
GGCCGAATCA GTATCCAGAG AAGGCGATTC CAAAGTTTTC AATCCTCGCG AAACGCGGGG
AAAAGATTTC GATACACGGC GACGGCGACG CGACGCGTTC GTACATGCAC GTTGACGATG
CGTCTTCGGC GTTCGATGTC ATTCTCCACC GCGGGACGAC GGCGCAGATT TATAACATCG
GCTCGCGCGA AGAGCGGACG ATCTTGTCCG TCGCTCGGGA TGTCTGTAAG CTCCTCGATC
GCGACCCGGA AACGACCATC GAGCACGTGA GCGATCGAGC CTTCAACGAC CGAAGATATT
TCATCGATTG CTCAAAGCTT TTAGCGCTCG GATGGCGACA AGAAAAGTCC TGGGACGTCG
GTCTCGCGGA AACCGTGCGT TGGTACTCGA ATAACGACTT GAGCGCCTAC TGGGGCGAAT
TCTCACCTGC GTTGCGCCCG CACCCTTCGG CGAGCGCGGA CGGTCGACGA CGATCGCTCG
AGTTTGATTT CACAAACGAG CTTGATGATT GCACGACACT GGCTTTGTAA GTGTGAGTGA
TTGGAACTCC AGATTGTGGT TCAAATTGGT CCAATCCCGA GTCGACGAAA GTCTTTTTCC
AAGTTTTTTT CCAAGAATTA TTTGCGTACA TCATCAGCTT GCACTCGCCT CCCGGTTTGA
GAGTCA
 
Protein sequence
MRILLTGGAG FIGSHVAERL ASRHPEYTIV ILDKLDYCSS LKNLERAKEC ANVRFVKGDV 
RSFDLLSYVL QSERIDTVMH FAAQSHVDNS FGNSYEFTKN NIEGTHALLE ACVRAQKTEI
RRFLHVSTDE VYGENLMDSN TEHASLLTPT NPYAATKAGA EMLVMAYGRS YGLPYIITRG
NNVYGPNQYP EKAIPKFSIL AKRGEKISIH GDGDATRSYM HVDDASSAFD VILHRGTTAQ
IYNIGSREER TILSVARDVC KLLDRDPETT IEHVSDRAFN DRRYFIDCSK LLALGWRQEK
SWDVGLAETV RWYSNNDLSA YWGEFSPALR PHPSASADGR RRSLEFDFTN ELDDCTTLAL