Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28464 |
Symbol | |
ID | 5006378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009372 |
Strand | + |
Start bp | 83947 |
End bp | 84825 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | |
GC content | 58% |
IMG OID | 640421799 |
Product | predicted protein |
Protein accession | XP_001422297 |
Protein GI | 145356143 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.167992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00580538 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAAAGG TGAAGATAAT GCTAATATTG TCGATGGTGT TGATACTGCG CATGCCGAGC GCACTCGCAG GCGCACTCAC ACACGCACTC CTCCGTGTGG GTGGTCCACG TGTAAGGCAA GCTGTCGAAA AAGGGATGAA ACAAGGCATT ATGGATTCGT TTCCAGGAGG CGTCCAGGAC CTCCTCGCAT ACTTGCACCG CCACAGAGAG GACGAAATCA AACAGGAGTT TGGGTGCATG GCGCTCATGA TCATGTGCCG GGAAAACACT GAGAACAGAC GCATCGCCGG AGAGCAGGGC GCGATCCAGG CCGTCGTGAA CGCCTTGAAC CGCCACAGAG AGAACAAGGA AGTGCAGAGG GACGGACACA TGGCGCTCGT GATCATGTGC GAGGACAACA CCGAGAACAG ACGCATCGCC GGAGAGCAGG GCGCGATCCA GGCCGTCGTG GACGCCTTGA ACCGCCACAG AGGGAACAGG GAAGTGCAGA GGGACGGACA ACTGGCGCTC GCGATCATGT GCAAGGACAA CACTGAGAAC AGACGCATCG CCGGAGAGCA GGGCGCGATC CAGACCGTCG TGGACGCCTT GAACCGCCAC AGAGGGAACA GGGAAGTGCA GAGGGACGGA CAACTGGCGC TCGCGATCAT GTGCAAGGAC AACACTGAGA ACAGACGCAT CGCCGGAGAG CAGGGCGCGA TCCAGACCGT CGTGGACGCC TTGAACCGCC ACAGAGGGAA CAAGGAAGTC CAGGCGAACG GGCACATGGC GCTCGCGAGC ATGTGCATTA ACAACACTGA GAACAGACGC ATCGTAGACG CGTATGGGCA AACAGTTAGT TATTCTCCAC AGCCTCCATT CGCGCGACCA GAGCGTTGA
|
Protein sequence | MAKVKIMLIL SMVLILRMPS ALAGALTHAL LRVGGPRVRQ AVEKGMKQGI MDSFPGGVQD LLAYLHRHRE DEIKQEFGCM ALMIMCRENT ENRRIAGEQG AIQAVVNALN RHRENKEVQR DGHMALVIMC EDNTENRRIA GEQGAIQAVV DALNRHRGNR EVQRDGQLAL AIMCKDNTEN RRIAGEQGAI QTVVDALNRH RGNREVQRDG QLALAIMCKD NTENRRIAGE QGAIQTVVDA LNRHRGNKEV QANGHMALAS MCINNTENRR IVDAYGQTVS YSPQPPFARP ER
|
| |