Gene OSTLU_28443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28443 
Symbol 
ID5006381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009372 
Strand
Start bp47287 
End bp48653 
Gene Length1367 bp 
Protein Length379 aa 
Translation table 
GC content57% 
IMG OID640421802 
Productpredicted protein 
Protein accessionXP_001422292 
Protein GI145356131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0994162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000330714 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTTTGAAGCG ATGCGAAACA AACGAAGGAC GCGACGGCTT CGTATCACGG TGATTTCCAT 
TACGCTGGCG TCATCCATGT CGTTCATCAT GTACCGTAGT CTTTCGTCGT CGTCGTCGTC
GTTGAAAACG CACCGTGACG ACGTCTCGCC ACTTGAACGT TCAATCGCTG ACGTCGTGCG
CGACTTAAAG GCTACGCGCG AGCGTGTGTT GCGCGATGTT TTAGCGACCG CAGTGAGTAC
GGATACGACG GATGCGCGAG AGGTCGAAAA CAGTTCGCCG ATCGCGGACG CGCTCGATCA
AGCGAAGCGA ATCATCGAGA ACTTTGACCG CGCTGGTCGC TCGAACGCCA GAGAGGATGA
AGCCGAATCA CTCGAGACGT TACGTAGTGT AGTCGAGAGC GTGAGTGATG TACAACGTTT
AGCGGCAAAT CCGAATTCGC CGGTGGTGAG GCGCGCGAAG AAGCGTTCAG AGCTGTTCAA
CAGAATTCAC GACGCAAATT TATGGGGCAG CGCGGAGTCG AGATCCGGGG GCGGTTCGAC
GAAAGCGACG ACGAGTACCG CGGCGAGATG TATCGGCGAA TGGATTCGAA AGTATGACAT
CAAGACTTTC TTGGACTTGC CGTGCGGCGA CGCGAATTGG CAAGCAGGCA TCCCTGGGAT
TGAGAACGTA AGATACACTG GCATGGATAT AAGCGTCGGC GCGCTCGAGA CGGCGAAGAC
GCGCATGTCT GAGGTTCAAA CCGATATCGA CGATTTTCGC ACGCATGATA TCGTCGCGTT
ACCTATGCGC CAACGTTACG ACGCCATCAT GCATCGCGAC GTCGTGCAAC ACTTGTCTTA
CGAAGAAGCC CTGCGAGGTT TGTCCAATTT CGCGAAGAGC GGTTCGACGT ACTTCATCGT
CAGCACGCAC CCGAAATCGA CGGAGCGAGG CGTGGAATCG GACGTCGGTG TAGCGCGCGA
TATTGGATAC ACGTATCAAA ACAACATGCA GTCGGAGCCA TTCAACTTCC CGCCGCCGTT
GGAAATGTGC GACAACTACG CGAACAACGA CGCTTCAAAG ATTGCGATTT GGAGAATCGC
GGACCTTCCG AATTTCGAAC GTAAGCTCGC GCATATTTCA ACGCACGAAA GCGGCGCGCG
AAAGATTTGA CGTTAGCGTA GCGCGGGTTG TCATTCGCCA CCACGCGCTC GAGCGTCGCG
CGCGGCGACG CGCGGCGCGA CGCTCGAGCG CGCATCGACC GGCGTCGCTC GTTCGCACCA
AACCGCGCGC CAAACGCGCG CGGCGCGTTC GAACGTCGCC GTCGCGCGCG TCGCGAGAAA
AGGCGCGAAA TCACACGCGC GCGCGGCGCT AAGATTGCGT GTCCACG
 
Protein sequence
MRNKRRTRRL RITVISITLA SSMSFIMYRS LSSSSSSLKT HRDDVSPLER SIADVVRDLK 
ATRERVLRDV LATAVSTDTT DAREVENSSP IADALDQAKR IIENFDRAGR SNAREDEAES
LETLRSVVES VSDVQRLAAN PNSPVVRRAK KRSELFNRIH DANLWGSAES RSGGGSTKAT
TSTAARCIGE WIRKYDIKTF LDLPCGDANW QAGIPGIENV RYTGMDISVG ALETAKTRMS
EVQTDIDDFR THDIVALPMR QRYDAIMHRD VVQHLSYEEA LRGLSNFAKS GSTYFIVSTH
PKSTERGVES DVGVARDIGY TYQNNMQSEP FNFPPPLEMC DNYANNDASK IAIWRIADLP
NFERKLAHIS THESGARKI