Gene OSTLU_28440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28440 
Symbol 
ID5006357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009372 
Strand
Start bp43520 
End bp45184 
Gene Length1665 bp 
Protein Length505 aa 
Translation table 
GC content55% 
IMG OID640421778 
Productpredicted protein 
Protein accessionXP_001422291 
Protein GI145356129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.402869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000343872 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
CACGCGAAGA CGCTCGCGAG TCAGAAGTAC GATGAGACAT CACTACAAAC CCACACACGT 
GATCTCACAG TAGCTTTACG ATGCCGCGAT TCAGTAGGAA ACGCGCGTTG AGCATACTTT
TTGCGTGCGT CGTCACGAGT TCGATTTATT TCTACGCTTC GCACACGGGA CGTTCGAAAA
TCTCGATAGC AGTCGACGAC ATCGCGAAAC GTGCGAGTGC GCTCCATTCG CCACGCTCGC
GAGATGTGGA AAGCTTACGC AGCGTCTCTC GTCGCGCGAG CCCGGTTGCG AGTTTTGACT
TTGAGTTCGC CGAGTTGAAG TTTCAAAGAG TCGTCGACGC GAGCGCCGTC GGCGACGCCG
CTTCAACCAC GCCGGCGTCT ATATCGTGCG ACTCCGCTAT TAACGACTCC GCGCGAGTCT
TGACGGATGA TTTCAGCGAA ATCCTGGCGT GGGCATCGGC GGTGCGGCGC GAGTCGAAAC
TAGTGCATCT GGTGAAGTCA GCGACGCCGA GGGTGTTCGT CACCGGCTTG CTACACAACA
GCTGCGTGCT CATGCACCAC TACGTCGTCG AGGTGTTGAA GTTTATTCTC CTGTACGGCA
ACGATGAAGG TTTTGAGAAT GTCTTCGTAT CCCTGTACTC GAGCGGCGAC GGTGACTGCG
CGGTGTTGAC GCTCGAAGCG TTCAAAGAAC TTTTAGACGC CATCGGCGTT CCAAACGTCA
TCAAGACTCG GCAACGCGAG CGTATTCCTG GCATGGCGCG CATCGACTTT TTGCAAAGCA
TTCGAAACGC GGCGATGGAA CCTTTATATT TGAGTGATAC ACCGTACGAC GAAGTCGTGT
TTCTTTCTGA CGCATTCTTT TGCGCCGGAG ACATTGTGCG CTTGCTACGT CACACCGAAG
CGAGCATCAA GTGTGGATTA GATTTTGATG GTACCACGAA CGCGATGAAG TTTCGAGACA
CGTGGGTCGC GCACGACATG AGTGGACGCA TGTTCACCAA AGAGTTCCCG TTTGTGCACG
ACGTCGTCTC GTCGCACGCC TTGAACGGCG GGGCACCTTT CCAGGTTTTG TGCTGCTGGA
ATGGCCTACT GACCTTGCGT GCAAAAGTAT TTACTGATCT CGGCGTGCGG TTTAGACGCT
CTTTAGACGA TACAGAGTGT CACGCCGCGG AAACCGAGCT CATTTGTCAC GATTTTGCGG
CGCTTGGACA CCCGAAGATG TTGGTTGATC CGCAAGTGAC GGTGACGTAT ACAAAGGCGG
AGTACGTCGC GCTGAGTAAT TCGCGCTCGA GCCCGCACTC GTATTCTTTG AGGCGCACAA
ACATGTTCTC GAATGAGTCG ATCGCTACGG TGGAGACGTG GGCAGAGCGC CCGTCGAGCA
CGGAATGTGC CCCACTCGAT GGGCACGCGG GCGATCATCC AGACAGAGGA CGAATTCGAC
ACGTCGATTG GAACGCGCAC TACGCCGAAA TGGGTGTTCC TGTTGCATCG GAGAAGAAGA
TTACGAGTTT ACACGCCTGT GACGGTCCTT CGGCGAGCCA GTGCGTGCTG AGTGGTGGTA
AACGCGCATT TGTTTCGCGC GACGCGATGA GTAGATGAAT AAAACATTCA GATTTGCTGG
CAGCGGTGAT TGGAACGCTT GCAGTATGAC TTTCGTTTGA CGTGA
 
Protein sequence
MPRFSRKRAL SILFACVVTS SIYFYASHTG RSKISIAVDD IAKRASALHS PRSRDVESLR 
SVSRRASPVA SFDFEFAELK FQRVVDASAV GDAASTTPAS ISCDSAINDS ARVLTDDFSE
ILAWASAVRR ESKLVHLVKS ATPRVFVTGL LHNSCVLMHH YVVEVLKFIL LYGNDEGFEN
VFVSLYSSGD GDCAVLTLEA FKELLDAIGV PNVIKTRQRE RIPGMARIDF LQSIRNAAME
PLYLSDTPYD EVVFLSDAFF CAGDIVRLLR HTEASIKCGL DFDGTTNAMK FRDTWVAHDM
SGRMFTKEFP FVHDVVSSHA LNGGAPFQVL CCWNGLLTLR AKVFTDLGVR FRRSLDDTEC
HAAETELICH DFAALGHPKM LVDPQVTVTY TKAEYVALSN SRSSPHSYSL RRTNMFSNES
IATVETWAER PSSTECAPLD GHAGDHPDRG RIRHVDWNAH YAEMGVPVAS EKKITSLHAC
DGPSASQCVL SGGKRAFVSR DAMSR