| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28436 |
|---|
| Symbol | |
|---|
| ID | 5006337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009372 |
|---|
| Strand | + |
|---|
| Start bp | 36135 |
|---|
| End bp | 37450 |
|---|
| Gene Length | 1316 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640421758 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422288 |
|---|
| Protein GI | 145356123 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.981299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.211421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TCGCGTCGAG ATCTCGTGAG CGTCGTCATC GAGCGCCCTC GAGGCGCGCG CGGTATTCGC
GAGCATGTCG TCGAGATAAT CTCCGAAAAT CTAGACGCGC TCGACCGAGA CGCCCGTCCG
CCCGCATGCG CATCCTTCTC ACCGGTGGCG CCGGCTTCAT CGGCTCGCAC GTCGCCGAGC
GCCTCGCGTC GAGGCATCCC GAGTACACGG TGCGCGCACG ATTTCGACCA CGTGTGCGTG
CGTCGAACAA CGCACGGACT TTGCACCCAT CTCTCGCGCG AACGACTGAC CGCGAACGAC
TCGTCGCGCT CGGACAGATT GTCGTCCTGG ACAAGCTCGA CTATTGCTCG AGCTTGAAAA
ATCTCGAACG CGCGAAAGAA TGCGCGAACG TGCGGTTCGT CAAGGGCGAT GTGCGTTCGT
TCGATTTATT GAGTTACGTC TTGCAAAGCG AGCGCATCGA CACCGTCGTG CACTTCGCCG
CGCAGAGTCA CGTGGACAAC TCTTTCGGGA ACTCGTACGA GTTCACGAAG AATAACATCG
AGGGCACGCA CGCGTTACTC GAGGCGTGCG TGCGAGCGCA GACGACCGAA ATTCGACGAT
TCCTGCACGT GTCCACGGAT GAGGTATACG GGGAAAATCT CATGGATTCA AACACCGAGC
ACGCGGCGCT CCTGACGCCC ACCAACCCGT ACGCCGCGAC CAAGGCGGGC GCGGAGATGC
TCGTCATGGC GTACGGACGC TCGTACGGAT TGCCGTACAT CATCACTCGC GGAAACAACG
TGTACGGGCC GAATCAGTAT CCAGAGAAGG CGATTCCAAA GTTTTCAATC CTCGCGAAAC
GCGGGGAAAA GATTTCTATA CACGGCGACG GCGACGTGAC GCGTTCGTAC ATGCACGTCG
ACGATGCGGG TTCGGCGTTC GACGTCATTC TCCACCGCGG AACGCCGGCG CAGATTTATA
ACATCGGCTC GCGCGAAGAA CGGACGATCT TGTCCGTCGC TCGGGATGTC TGTAAGCTCC
TCGATCGCGA CCCGGAAACG ACCATCGAGC ACGTGAGCGA TCGAGCCTTC AACGACCGAA
GATATTTCAT CGATTGCTCA AAGCTTTTAG CGCTCGGATG GCGACAAGAA AAGTCCTGGG
ACGTCGGTCT CGCGGAAACC GTGCGTTGGT ACTCGAATAA CGATTTGAGC GCGTACTGGG
GCGAATTCTC ACCCGCGTTG CGCCCGCACC CTTCGGCGAG CGCGGATGGG CGACGACGAT
CGCTCGAGTT TGATTTCACG AATGATTCTG ACGATCGCGC GACACCGACT TTGTAA
|
|---|
| Protein sequence | MRILLTGGAG FIGSHVAERL ASRHPEYTIV VLDKLDYCSS LKNLERAKEC ANVRFVKGDV
RSFDLLSYVL QSERIDTVVH FAAQSHVDNS FGNSYEFTKN NIEGTHALLE ACVRAQTTEI
RRFLHVSTDE VYGENLMDSN TEHAALLTPT NPYAATKAGA EMLVMAYGRS YGLPYIITRG
NNVYGPNQYP EKAIPKFSIL AKRGEKISIH GDGDVTRSYM HVDDAGSAFD VILHRGTPAQ
IYNIGSREER TILSVARDVC KLLDRDPETT IEHVSDRAFN DRRYFIDCSK LLALGWRQEK
SWDVGLAETV RWYSNNDLSA YWGEFSPALR PHPSASADGR RRSLEFDFTN DSDDRATPTL
|
|---|
| |