Gene OSTLU_25788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_25788 
Symbol 
ID5006403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009372 
Strand
Start bp108065 
End bp109430 
Gene Length1366 bp 
Protein Length347 aa 
Translation table 
GC content52% 
IMG OID640421824 
Productpredicted protein 
Protein accessionXP_001422302 
Protein GI145356153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.141405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00195856 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATCGTTTTAA AAAACCGCAC ACTGCGCACG CGTGCATGCC ACTAAATCTC TATCTTCGAA 
GCCGCGCGCG CGCATGGGAT CGCGTAAGCA ACGCGTCGCC GTTGTCCTGG CGCTCGTTGC
CCTCGTCGCT GGAGGTGGAC TAGTGAAACA GCTGGACACG CGCGGGTGTT CGAAAGATAC
TTCAGCCGCG ACGGTAAGTG GCGCTTCGTC ATCAGCTCAA CCACGCTCGA CGGGAGCTGA
ATCGCGAGAC AATAAACGCG AGACGCCACC TATCGATGCT GTCTCCGCGA CGAAGATTGA
TGATCGAGCT GAAAAGTACG CTATAATCGT CCCTATGCAC GCCGTCACGC AGCTCGAAGT
CATGAAAACC ACGTGGAAAA TATTTCCACC TTGCGCTGCC GATGCGCGAG CCGCACAAAT
AATTGATTTG ATTTTCTTAT CCGACGTAGA CCTCTCGTCG CTCGACGTCA CAGGGGGTCA
CTGCTTTCAG CGAGTGTATC GCCTGCGACC GTTCATCCCG AGCTGCTACA ACGTATACGC
ACAAGCACCA CCGTATTGCT TCTTCACGAT GATACTTCAT CTCGACTTAG ACCGTACGTA
CGACGCCATA CTTCAAGTAG AAGCTGATTC CGTGCCCGTG AAATCCAATT GGTTGGACGC
CGCCGTGGAA AACATATTAA AGCCGACATC GGGCGAAGTG TGGATACACG CAGCGAAAAA
TGAACGCGGT GGAAACAATT TCAACGGTAA TGGCGCGTAC AACTTGCAAA ATGACGAATT
TCGTCAATTC ATAATAGGTT ACAGGGAATG GTTTTACACA AAGGCGGTCA ACTCTGGCGA
CACGGCGTTC GATACAAACA TGATTACGTT TGCAAAAGAA GTGGGGTCTT TCGGAAATTT
CTCCAACACG CATCTGCGTG CGTCGAAAAG TCTTCGGAAC TGCGATCTCA TGTCCCTGAC
AGCGTGTCGG TCGGCGGTGG ATGCGTCCAC GTGGGGCGGC GCGACGCCTG AAGCTCTTTT
CGTTCACAGT CACGATCTGA AAGATCCTTC GCGAGTGAGG AGTCAAATCT TGGTGGAAAT
GCTTGGTAGA GACGATGGTA TACGGCAATT CAAATGAGTA TGCTTGCGAC TATTGAGTTT
TCGACATGCT GATGATTTCT TCGTACAGGG CGTCCCACGC CGCCGGAAGC GCTCGCCCGC
ACTTATCGAG AAGAGTGTAC GGACAGCGGA CACCCATGGC AACATTATTC ACGCGTATCG
GACGCAGATC TGCATCAAAC AAATCTTTAT TCAACGCATA ACGATTTACT TGCCGCTGCT
GCATGGTCAC TTCTAATTGA CCGATGCGTA GGACCTCCTT GAAGTT
 
Protein sequence
MGSRKQRVAV VLALVALVAG GGLVKQLDTR GCSKDTSAAT VSGASSSAQP RSTGAESRDN 
KRETPPIDAV SATKIDDRAE KYAIIVPMHA VTQLEVMKTT WKIFPPCAAD ARAAQIIDLI
FLSDVDLSSL DVTGGHCFQR VYRLRPFIPS CYNVYAQAPP YCFFTMILHL DLDRTYDAIL
QVEADSVPVK SNWLDAAVEN ILKPTSGEVW IHAAKNERGG NNFNGNGAYN LQNDEFRQFI
IGYREWFYTK AVNSGDTAFD TNMITFAKEV GSFGNFSNTH LRASKSLRNC DLMSLTACRS
AVDASTWGGA TPEALFVHSH DLKDPSRVRS QILVEMLGRD DGIRQFK