Gene OSTLU_18800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_18800 
Symbol 
ID5006379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009372 
Strand
Start bp42595 
End bp43395 
Gene Length801 bp 
Protein Length266 aa 
Translation table 
GC content56% 
IMG OID640421800 
Productpredicted protein 
Protein accessionXP_001422290 
Protein GI145356127 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.271262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000965532 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGTGC TCGTGCTCGG GTCGAGCGGG TTGATCGGCG CACCCTTGGT GGCTCGTCTT 
CGTCGCGCCG GTCACGATGT CACGGAATGG GACGTCGCCA TGGATCGCGC GCACGATTTA
ACGGACGCCG CGAACGTGCC TGGCGCGCGC GACGCGATCG AGTCGAGTGA TTTCGTCTTC
TTTCTCGCCT TTGACGTCGG CGGCGCAAAG TACATCAGTA CTCCCACCGC GAGTTTCATC
CATCGAAACA GTCTCTTGAT GGCGAACACG TTTAGTTTAC TGCACGGCAA GCGGTTCGTT
TTCGCCTCGA GCACGATGTC AAACATGGAC GTCCCTTACG GCACTTTAAA ACGTCTCGGC
GAGCACTACA CGAGCGTGCT CTCTGGAATC TCTGTGCGAT TCTGGAACGT CTACGGTCCT
CAAAAGTACG GCGAGAGATC GCACGTGATC ACCGATTTTA TTCACAAGCT TCGAACGACC
GGTTCGATTA CCATGATGAC TTCTGGCGCA GAAAAGCGCC AGTTTCTGCA CACAGAAGAC
TGCGCGCGGT GTTTGGAAAC AATCGCCGCG CACTACGACG AGATGCCACC CGTAGTAGAC
GTCACGAGTT TCGAGTGGAC GACTGTTAGG GAGCTGGCTG AGTTGCTTTG CGATGACGTG
GTCGCTCGTA ACGACAACCG AGACAGCCAC ACGAAGTCGA ACGAACCGAG TCCGTTCATC
CTTAGTTACT GGCGCCCCGC GATAAGTTTA CGAGAAGGCA TCGCGCAACT GCTCGCAGAA
TCAAGGACGG CGAAACGTTA A
 
Protein sequence
MRVLVLGSSG LIGAPLVARL RRAGHDVTEW DVAMDRAHDL TDAANVPGAR DAIESSDFVF 
FLAFDVGGAK YISTPTASFI HRNSLLMANT FSLLHGKRFV FASSTMSNMD VPYGTLKRLG
EHYTSVLSGI SVRFWNVYGP QKYGERSHVI TDFIHKLRTT GSITMMTSGA EKRQFLHTED
CARCLETIAA HYDEMPPVVD VTSFEWTTVR ELAELLCDDV VARNDNRDSH TKSNEPSPFI
LSYWRPAISL REGIAQLLAE SRTAKR