| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_51766 |
|---|
| Symbol | |
|---|
| ID | 5006203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009371 |
|---|
| Strand | - |
|---|
| Start bp | 270072 |
|---|
| End bp | 272207 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640421624 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422250 |
|---|
| Protein GI | 145356040 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00617] replication factor-a protein 1 (rpa1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0465734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCGACGCGA CGCGCGAGCG ACGATGGGCG CCGACGCGAT CGCCGCGCTG ACCCCGGGCG
CGGTGAATAA AATTCGCGAA TCCGCCGGCG CGACCGACGT CTGCGTGCAG GCGCGTGCGC
GACGCGACGA CGACGGGACG ACGGCGAGCG CGGATGGATG CGCGTTCAAA CGCGCGCGCG
CGTCGCGACG AGCGCGACGA CGCGCGCGAT CGAGGGGGGC GACGACGAGG GCGCGGACTG
ATGGGTGGAG TTTTATCGCG CGCAGGTGCT CGACTTTAAG AGCGCGGATG AGGCGTACAG
GTGCGCGCGC GACGCGATGA TCGCGGAACG CGGGGACGGT CGTTGGAAGT TTGAATTTAA
ATTCAAGTTT TGAATGAGCG ATCGAGCGGG CGACGCGCGT GGGCGGGCGC GGGGGGGACG
CGAGGCGAGG CGTGGGCGCG CGCGGGGATG GTTCGTTTGA CTGACGGTGA TGACGTGGAT
TTCGGGCGGT GCAGTGCGAC GCTGAACGAC GGGGAGAACA CCATCGCGGC GAAGTTCGCG
GCGACGTGCG GGGAGAAGCT GTCGAGCGGC GCGGTGAAGG AGAACGCGGT GTTGAAGCTC
ACGGACGTGG CGTTCGAAAC GGATGGCGTT GAGCGTAAAC CGTTCGCGGT GATCAACGGG
TTCGAAGTCG TCGACGCGGA TGTGAAGGAG AAGGTGACGA CGCCCGCGGC GAAGGCGGCG
AAGACGGAGC CGAAGACGCC GGCGAGCGCG GAACGCGCGG CGGTGCCGCT CGCGGCGCTT
AACCCGTACC GCACGCCGTG GACGGTCAAG GTGAAGTTGA CGAACAAGGG GAACGTGCGC
GAGTACAAGA GCGCGCGTGG TCCGGGTAAG GTTTGCTCGG TCGACTTTGT CGACGAGGAG
GGTACCGCCA TCGGCGCGAC GCTCTGGCGC GAAGCGATTG AAAAGTACGA CTCAGTTTTG
GAAGTCGGCA AGGTTTACTA CGTCTCCAAG GGTTCTCTCA AACCGGCGGA TAAGCGATAC
TCGACTTCGG GTAACGATTA CGAGATGAAC CTCGACGGCA AGTGCGAAAT CGACGTCTGC
AACGACATCG ATCAGTCGAG CGCGCAAAAG ATGCAACGCG CGTACGCCTT CGTGCCCATC
AACAAGCTCG CGAGCAAGAT TGGTGCGCGT GGCAACGTCG ACGTCGTCGC CGTGGTCAAG
GAAGTCAGCG AACTGTCGTC CATTCGCCGC AAGAGCGACA ACACCGAGTT GAACAAGCGC
GAAGTCGTCT TGGTCGACGA CTCGGCGAAA ACCGTCAGGT TGACTCTTTG GAACGCGCTC
GCCGTCGAAG TCGGCGAACA GTTGGCGTCG ATGACCAACC CGGTGGTGGC TATTCGTTCT
GTTCGCGTCG GTGATTACGA AGGCGTCTCC ATCGGCACCG TCTCCCGCTC TGACATCGTC
ATCGATCCGG AGGACGTGCC GCGCGCCGTC GAAATCAAAA AGTGGTGGTC TGAGGGCGGC
TCCAGCGCCG AAACCACGGC CGCGGGCGAA GGTCTCACCA GCGCGCAGCA AGGTCAAAAG
AGCGAAATTA TGGCGAGTAA CCTCGCCGAG CTCCAGCCGG AGGAAATCGC CCCGGTGACC
GACAAGCCGA CGTTTGCGTG GGTGTGCGCG CACACCGTCA TGTGCAAGCC AGATCAAACC
ATGTACTACA CCGCCACACC CGAAGAAGGA AACAACAAGA AGGTGATCGA AAGCGATGGT
AAATGGTACT GCGAAGCGAA CGGGCAAACC TACGACACTT GCGAACGCCG TTATATTATG
CGATTCAAGG CGCAGGATAG CTCCGAAGGC GCGTGGTTGA ACGCGTTCAA CGAAGAAGCG
ACGAAGATGT TCGGCATGAC GGCGAACGAA ATGCACGAGT TGAAGGAAAA CGACTTCGCG
GCGTACGAAC GTGCGGTGAA GAAGATGACG TGCCAGCACT GGTCCTTCCT CGTCAAGGTC
GTCACCGAGG AATACCAAGG CGAAAGCAAG CGTCGCATGA CGGCGGTCAA GTGTAACCCG
GTCAACTACG CCGCGGAATC AAAAAAGCTT CTCTCCAAGA TGGGTGTCGT CTAAATCTCA
TAAATCTGAT AGATATACAA TTTGGAACTT TAGCTT
|
|---|
| Protein sequence | MGADAIAALT PGAVNKIRES AGATDVCVQV LDFKSADEAY SATLNDGENT IAAKFAATCG
EKLSSGAVKE NAVLKLTDVA FETDGVERKP FAVINGFEVV DADVKEKVTT PAAKAAKTEP
KTPASAERAA VPLAALNPYR TPWTVKVKLT NKGNVREYKS ARGPGKVCSV DFVDEEGTAI
GATLWREAIE KYDSVLEVGK VYYVSKGSLK PADKRYSTSG NDYEMNLDGK CEIDVCNDID
QSSAQKMQRA YAFVPINKLA SKIGARGNVD VVAVVKEVSE LSSIRRKSDN TELNKREVVL
VDDSAKTVRL TLWNALAVEV GEQLASMTNP VVAIRSVRVG DYEGVSIGTV SRSDIVIDPE
DVPRAVEIKK WWSEGGSSAE TTAAGEGLTS AQQGQKSEIM ASNLAELQPE EIAPVTDKPT
FAWVCAHTVM CKPDQTMYYT ATPEEGNNKK VIESDGKWYC EANGQTYDTC ERRYIMRFKA
QDSSEGAWLN AFNEEATKMF GMTANEMHEL KENDFAAYER AVKKMTCQHW SFLVKVVTEE
YQGESKRRMT AVKCNPVNYA AESKKLLSKM GVV
|
|---|
| |