Gene OSTLU_42161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42161 
Symbol 
ID5006200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009371 
Strand
Start bp260653 
End bp260997 
Gene Length345 bp 
Protein Length114 aa 
Translation table 
GC content63% 
IMG OID640421621 
Productpredicted protein 
Protein accessionXP_001422246 
Protein GI145356032 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0806882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.994618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC GATCAACCCT ACGCGTCGAG ACTGACGATG GAAACGCGGG GCGCGCGACG 
ACGCAGAGCG CGTGCCGGGC GTACGGCGCG GGATTTTTGA ACGAGGACGA AGTCACGGCG
CGCGTGGTGA GCGTGGTGAA GAACTTCGCA AAGGTGGACG CGAGCAAGGT GACGGCGACG
TCGGCGTTCG CGGGCGATCT CGGGCTGGAT TCGTTGGACA CCGTGGAGGT GGTCATGGCG
ATGGAGGAGG AATTCGCGGT GGAGATCCCG GACGCGGAGG CGGATAAGAT ACAGTCGATT
CCGGAGGCGG TGAGTTATTT GGCCGCCAAC CCGAACGCGA AGTAG
 
Protein sequence
MDDRSTLRVE TDDGNAGRAT TQSACRAYGA GFLNEDEVTA RVVSVVKNFA KVDASKVTAT 
SAFAGDLGLD SLDTVEVVMA MEEEFAVEIP DAEADKIQSI PEAVSYLAAN PNAK