Gene OSTLU_42106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42106 
Symbol 
ID5006272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009371 
Strand
Start bp148977 
End bp149468 
Gene Length492 bp 
Protein Length163 aa 
Translation table 
GC content60% 
IMG OID640421693 
Productpredicted protein 
Protein accessionXP_001422109 
Protein GI145355741 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only
[T] Signal transduction mechanisms
[Z] Cytoskeleton 
COG ID[COG5126] Ca2+-binding protein (EF-Hand superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.87419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGGA AACACCTCAC GGACGAGGAG CTCGCGAGCG CGTGGCCGTA CCTCACGCGC 
GCGCAGGTGC AGGAGTTCAA GGAGGCGTTC GATATATTCG ACGTCGACGG CGGCGGGACG
ATCACGGCGG AGGAGCTCGG GGAGGTGATG AAGTCGCTCG GGCAGAAACC GACGAGGGCG
CAGCTGGAGG CGATGGTGCG GGAGATCGAC GCGGACGGGG ACGGGGCGAT CGATTTTCCA
GAGTTTTTGA CGATGATGCT GCGGAAGATG AACGAGGGTG ATCCGGAGAG GGAGCTCAGG
GACGTGTTCA CGGTGTTCGA TAAGGATCAG AGCGGGACGA TTAGCGCGGA TGAGCTGAAG
AGCGTGATGA AGGTCATCGG GGAGAAACTG ACGGAGCAAG AGATCGAGGA CGCGATTCGG
TTGGCGGATA CCACGGGAGA CGGAGAGGTT GATTACGATG AGTTCATCGC GTTCGTGCTG
TCGTCGAATT AA
 
Protein sequence
MSRKHLTDEE LASAWPYLTR AQVQEFKEAF DIFDVDGGGT ITAEELGEVM KSLGQKPTRA 
QLEAMVREID ADGDGAIDFP EFLTMMLRKM NEGDPERELR DVFTVFDKDQ SGTISADELK
SVMKVIGEKL TEQEIEDAIR LADTTGDGEV DYDEFIAFVL SSN