| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_42027 |
|---|
| Symbol | |
|---|
| ID | 5006305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009371 |
|---|
| Strand | + |
|---|
| Start bp | 264340 |
|---|
| End bp | 264927 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | |
|---|
| GC content | 69% |
|---|
| IMG OID | 640421726 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422143 |
|---|
| Protein GI | 145355812 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1896] Predicted hydrolases of HD superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.0156901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCGC CGTCGTCCGC GGCGCCGTCC GCGCGCGCGT GCGTCGATCT CATCGCGCGG
GCGGGAAAGC TCAAGGCGCT CAGGCGCGCG GGATGGGTCC AGCGCGGCGT GCGCGACGCG
GAATCCGTCG CCGAACACTC GTGGAGAGTC GCGCTCATGA CGATGCTCGC CGCGGATCGC
GACGACGCGT GCGATTCGGG GCGCGCGGTC GCGATGGCGC TCGTCCACGA CCTCGCGGAG
GCCGTCGTGG GAGACATCAC GCCGAACGAC GGCGTGAGCG ACGAAGAGAA GGCGGCGATG
GAGCGGGAGG CGATGGGGAC GATGACGGCG GCGCTGGGCG CGCGAGGCGA GGCGTTGATG
GCGCTGTGGG AAGAGTACGA GGCGGGAGAG AGCGCCGAGG CGAGGCTGGT GAAGGATATG
GATAAGTTGG AGATGATCGC GCAGGCGATG GAGTACGAGA CGGAGGAGAA CACGGGGAGG
GGGGAGGATT TGGAAGAGTT TTTCGAGAGC ACGCGAGGAC GGTATCGAAC GGCGACGGGC
GAGGCGTGGA GCGAGGAAAT CGAGCGACGT CGACCGCGGG CGGGGTAA
|
|---|
| Protein sequence | MPSPSSAAPS ARACVDLIAR AGKLKALRRA GWVQRGVRDA ESVAEHSWRV ALMTMLAADR
DDACDSGRAV AMALVHDLAE AVVGDITPND GVSDEEKAAM EREAMGTMTA ALGARGEALM
ALWEEYEAGE SAEARLVKDM DKLEMIAQAM EYETEENTGR GEDLEEFFES TRGRYRTATG
EAWSEEIERR RPRAG
|
|---|
| |