| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28382 |
|---|
| Symbol | |
|---|
| ID | 5006216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009371 |
|---|
| Strand | - |
|---|
| Start bp | 316262 |
|---|
| End bp | 317803 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 640421637 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422262 |
|---|
| Protein GI | 145356066 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.226671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GACGACGATG AAGACGATGA AGACGCGCGC GCCCGCGCTC GGGGCGACGA CGCGAGGAGG
ACGCCGAAGC GCGGCGTCGA AGACGATGCG GTCGACATCG CGAGGATCCG AAGCGTCGCG
ACGACGCGCG ATCGCGAACG ACGCGGCGCT GGACGCGACG TCGGCGGTGA ACGCGCGCGA
GGCGTTGAAA GCGTTTCCGA GAGTTGAATC GTTCGCGCAC GGACCGACGC CGTTGGAGTA
CTTGCCGCGA TTGAGCGAGA AGTTGAACGG CGTGCGAGTG TACGCGAAGC GGGACGACGC
GTACGGCGTG CTGACGGGAG GGAATAAGAC GCGAAAGCTG GAGTATCTCA TGGCCGAAGC
CCTCGCCGTG GGGGCGACGA TGGTGATGAC GCAAGGGGCG ACGCAATCGA ATCACGCGCG
GCAAACCGCG GCGGCGTGTG CGAAATTGGG ATTGAAGTGT CACGTCTTGC TCGAGGATCG
GACGGGACGC GAGGACGAAA ACTACACGCG AAACGGGAAC GTTTTGTTGG ATGATTTGTT
CGGTGCGACG CGAGAATACC GTCCGGGTGA CCAGGGGTTA AACATGAACG AAGAGCTTGA
GCGCGTGGCG GACGAGTTTC GCGCGAAAGG CGAGAAAGTG TACACCATCG TAGGCGGCGG
GTCGTGCCCG CGAGGCGCTT TGGGATACGT GCGCGCGGCG CACGAGCTCT TGGATCAAGC
GCGCGAGATG GATATCGAGT TCGATCATCT CGTGCACGCC ACCGGTAGCG CGGGTACGCA
GGCGGGACTC GCCGTCGGCT TACACTCCGT CGATTCTTCC CTTCCCTTGC TCGGGTTCGG
CGTCCGCGCG CCGCAACCGA CGCAAGAAGC CAACGTGCAC GCGCTCGCCC TCGCGACGTG
CGCCGAGCTC GGCATCCGTC CGATCGAGCG TTCCAAGATC GTCGCCGACA CCAATTACGT
CGGCGACGGC TACGGCATCC CGACCTCGCA AACCATCGAC GCCATCAGGC TCTTCGCGTC
GACGGAGGGC GTCCTCCTCG ATCCCGTCTA CAGCGGCAAA GCCGGCGCCG GTTTGATTGA
CTATTGCGCG CGCGGCGTCT TCAAACCGGG CGATCGAGTC TGTTTCTTGC ACACCGGCGG
CGCCACCTCT TTACACGGCT ACCTCGACTC TTTCTCGTCT TGATCTTGTT GTAATCGACG
TCCCGCTTTC GCCTTCCGTC GCGCGCGTCG GCGCCAGCGC TGGCAGAGGG CACCGCGCGC
GCCGCTGATG CATCACATCG CGACGCACCG TCACGATTCC GTTCCGTGAA TCGCGCGACG
CGCGCGCACA GACGAAAACG ATCAAACGAT CGACGATCGA CGCCCGCGAC GACGCGCCCG
AGGAGACGTT TTACGACGCG CACGAAAAGA TGAGCCTCGA GCAACCGTCC GTGGAAAAGA
TTAAAAAGAT GCCCAAGCCG AAAACGGTCG CCCCGGTGGT CGAAAAGGGC GAAACGACGA
CCGCGACGAA CGAATTGAAG CAGTTGGCGT TCGTGGTGAA CG
|
|---|
| Protein sequence | MRSTSRGSEA SRRRAIANDA ALDATSAVNA REALKAFPRV ESFAHGPTPL EYLPRLSEKL
NGVRVYAKRD DAYGVLTGGN KTRKLEYLMA EALAVGATMV MTQGATQSNH ARQTAAACAK
LGLKCHVLLE DRTGREDENY TRNGNVLLDD LFGATREYRP GDQGLNMNEE LERVADEFRA
KGEKVYTIVG GGSCPRGALG YVRAAHELLD QAREMDIEFD HLVHATGSAG TQAGLAVGLH
SVDSSLPLLG FGVRAPQPTQ EANVHALALA TCAELGIRPI ERSKIVADTN YVGDGYGIPT
SQTIDAIRLF ASTEGVLLDP VYSGKAGAGL IDYCARGVFK PGDRVCFLHT GGATSLHGYL
DSFSS
|
|---|
| |