Gene OSTLU_28292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28292 
Symbol 
ID5006278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009371 
Strand
Start bp161009 
End bp162217 
Gene Length1209 bp 
Protein Length402 aa 
Translation table 
GC content61% 
IMG OID640421699 
Productpredicted protein 
Protein accessionXP_001422221 
Protein GI145355979 
COG category[S] Function unknown 
COG ID[COG5202] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00000356497 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.994618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCG CGGCGGCGTT CGGGCGCGCG ACGGTGGTGT GCGCGCACTT CGGGGCGTGC 
GCGTACGCGA CGATGCTGGC GACGCGGCGG CGGTGCGGAT ACGTCGTCTT CGCGGGGTCG
TTCGCGTATC TGATGCGGTA TCACTTCGTC GCGGACACGG CGACGGCGTG GAAGAGCGGT
GAGGTGGACA TCAGCGGGCT GTTGATGGTG CTGGTGCTGA AGGTGACGGC GTGCGCGTTG
AATTATCAAG ACGCGGCGAC GACGAAGGCG AGCGAGATGA GCGAGTTTCA AAATCGACGG
CATCTGAAGC GGTTGCCGAG CGCGCTGGAT TACGCGAGCT GGTTGATGTT TCCGTGCACG
CTCGTGAGCG GGCCGGCGAT CGAGTTTAGG GATTACTCGG ATTGGTTGCG CGATCGAGGG
GTGTACGCGC GAGGGACGCC GAATCGCGTC GCGCCGGCGA CGCGCAAGCT TCTCGGCGCG
ATCGCGTGCT TGGGGATCTA CCAGGCGGTC GCGATGAGGT ATACGATAGA AAATACGTAC
TTGAACCCGA GCTGGGCGCA GTACTCGCTC GCCGAGCGCA TTTGGCACGT GTACGTGTAC
GGTCAAGGTA ATCGCGCCAA GTATTACTTC GTGTGGATGA TGGCGGATTT CGCCGCCACC
GTCTCGGGAC TTGGCTTTAG CGGGTACGAC GCCATGGGTA AGGCGCGTTG GGACACGGCA
GCAAATATAT ACCCGATCGG CGTGGAGAAG TCGGTGACGT TGAACGCCAT TCCGTTGTCG
TGGAACGTGA AAACTGGATT GTGGTTGCGC CACTACGTGT ACGATCGGGT GACGCCCAAG
GGTAAGAAGC CCGGTTTGTT GCAGATTTTG ATCACGCAAA TCGTCTCGGG CGTGTGGCAC
GGACTGCACG CCGGTTATTG GCTGTTCTTC GTCTCCTCCG CGTTCGCCGT CAACGCCGGT
CGTTTGATGT ACCGATGGAA GCAAACGCGC GTGCCGGAGA AGTATCGCGT CCTCGTCGAC
GTCCCTCTCT GGGCGTTTAC GCACGTCGCG CTCAACTACA TGTGCGCCGC TTTCATCTTG
GTCGATTTGA AGCAATGCAT ACAATCGTGG TCATCGATGC ACTACTTCGG CCACGTCGGC
ATCGCCGTCT TGCTCGTCTT CGGCGCCGTC TTCGCGCCGA GGCGCTCGTC CAAGCCCAAA
TCGGCGTAA
 
Protein sequence
MLSAAAFGRA TVVCAHFGAC AYATMLATRR RCGYVVFAGS FAYLMRYHFV ADTATAWKSG 
EVDISGLLMV LVLKVTACAL NYQDAATTKA SEMSEFQNRR HLKRLPSALD YASWLMFPCT
LVSGPAIEFR DYSDWLRDRG VYARGTPNRV APATRKLLGA IACLGIYQAV AMRYTIENTY
LNPSWAQYSL AERIWHVYVY GQGNRAKYYF VWMMADFAAT VSGLGFSGYD AMGKARWDTA
ANIYPIGVEK SVTLNAIPLS WNVKTGLWLR HYVYDRVTPK GKKPGLLQIL ITQIVSGVWH
GLHAGYWLFF VSSAFAVNAG RLMYRWKQTR VPEKYRVLVD VPLWAFTHVA LNYMCAAFIL
VDLKQCIQSW SSMHYFGHVG IAVLLVFGAV FAPRRSSKPK SA