Gene OSTLU_28287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28287 
Symbol 
ID5006275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009371 
Strand
Start bp154917 
End bp155666 
Gene Length750 bp 
Protein Length249 aa 
Translation table 
GC content65% 
IMG OID640421696 
Productpredicted protein 
Protein accessionXP_001422110 
Protein GI145355743 
COG category[A] RNA processing and modification 
COG ID[COG5104] Splicing factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0000137678 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.525512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGGA GAATAATCGG TCGGGGTGGG GAGACGATCA AGGGGCTGCA AGCGTCGTCG 
GGAGCGCACG TCGCGATCGA TCAAAACGTC GGCGAGGGCG AACCGAGGAA GATTACGATC
GCGGGCGCGG CGGCGTGCGT GGACGTCGCG AGCGAGTTGG TGGAGAATTT GCTCCTGGGC
ACGGGCGTGG GAGGCGGGTT GTTGGTCACC CCGGGACAGA TCACGCGGTC GATCGAGTGC
CCGAAGGAAT CGGTGGGGAA ACTCATCGGG CGCGGCGGCG AGACGATTCG CGGGATACAA
ACAGCCACCG GCGCGCGCAT GCAAATCGAT CAGACCCGTC AGCCGTGTCA GGTCATCCTC
GCCGGTTCCG AGGCGTGCGT GGAAGCTGGC GCGCAGGTGG TTCAAGAAAT CATCGACGGC
GGCTCGACGG CGGTGTTTAA CGAAATCGCT CGAGGCGGTC AAGGATTCGG CGGTCAAGGA
TTCGGCGGTC AAGGATACGG CGCGCAAGCC GCCGGTTGGG GCGCGCCTCA AGCGCAAGCC
GCCGCCTACG CCAATCCCGC GGCGTACGCG CAGCAACAAG CGATGTACGC GCAAATGTAC
GCGCAGCACT ACGGGCAGCA GTACGCCGCC GTCGCCCCCG TCGCCGCCGC CAACCCGTGG
CGCGCGCTCG ACGACGGCAA GGGCAACGTC TACTACTACA ACGCCCTCAC CGGTGTGTCC
CAGTGGGAGA AACCGAGCGA ATTGACTTGA
 
Protein sequence
MVGRIIGRGG ETIKGLQASS GAHVAIDQNV GEGEPRKITI AGAAACVDVA SELVENLLLG 
TGVGGGLLVT PGQITRSIEC PKESVGKLIG RGGETIRGIQ TATGARMQID QTRQPCQVIL
AGSEACVEAG AQVVQEIIDG GSTAVFNEIA RGGQGFGGQG FGGQGYGAQA AGWGAPQAQA
AAYANPAAYA QQQAMYAQMY AQHYGQQYAA VAPVAAANPW RALDDGKGNV YYYNALTGVS
QWEKPSELT