Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28287 |
Symbol | |
ID | 5006275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009371 |
Strand | + |
Start bp | 154917 |
End bp | 155666 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | |
GC content | 65% |
IMG OID | 640421696 |
Product | predicted protein |
Protein accession | XP_001422110 |
Protein GI | 145355743 |
COG category | [A] RNA processing and modification |
COG ID | [COG5104] Splicing factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0000137678 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.525512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGGGA GAATAATCGG TCGGGGTGGG GAGACGATCA AGGGGCTGCA AGCGTCGTCG GGAGCGCACG TCGCGATCGA TCAAAACGTC GGCGAGGGCG AACCGAGGAA GATTACGATC GCGGGCGCGG CGGCGTGCGT GGACGTCGCG AGCGAGTTGG TGGAGAATTT GCTCCTGGGC ACGGGCGTGG GAGGCGGGTT GTTGGTCACC CCGGGACAGA TCACGCGGTC GATCGAGTGC CCGAAGGAAT CGGTGGGGAA ACTCATCGGG CGCGGCGGCG AGACGATTCG CGGGATACAA ACAGCCACCG GCGCGCGCAT GCAAATCGAT CAGACCCGTC AGCCGTGTCA GGTCATCCTC GCCGGTTCCG AGGCGTGCGT GGAAGCTGGC GCGCAGGTGG TTCAAGAAAT CATCGACGGC GGCTCGACGG CGGTGTTTAA CGAAATCGCT CGAGGCGGTC AAGGATTCGG CGGTCAAGGA TTCGGCGGTC AAGGATACGG CGCGCAAGCC GCCGGTTGGG GCGCGCCTCA AGCGCAAGCC GCCGCCTACG CCAATCCCGC GGCGTACGCG CAGCAACAAG CGATGTACGC GCAAATGTAC GCGCAGCACT ACGGGCAGCA GTACGCCGCC GTCGCCCCCG TCGCCGCCGC CAACCCGTGG CGCGCGCTCG ACGACGGCAA GGGCAACGTC TACTACTACA ACGCCCTCAC CGGTGTGTCC CAGTGGGAGA AACCGAGCGA ATTGACTTGA
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Protein sequence | MVGRIIGRGG ETIKGLQASS GAHVAIDQNV GEGEPRKITI AGAAACVDVA SELVENLLLG TGVGGGLLVT PGQITRSIEC PKESVGKLIG RGGETIRGIQ TATGARMQID QTRQPCQVIL AGSEACVEAG AQVVQEIIDG GSTAVFNEIA RGGQGFGGQG FGGQGYGAQA AGWGAPQAQA AAYANPAAYA QQQAMYAQMY AQHYGQQYAA VAPVAAANPW RALDDGKGNV YYYNALTGVS QWEKPSELT
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