Gene OSTLU_28260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28260 
Symbol 
ID5006155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009371 
Strand
Start bp95801 
End bp97744 
Gene Length1944 bp 
Protein Length647 aa 
Translation table 
GC content56% 
IMG OID640421576 
Productpredicted protein 
Protein accessionXP_001422097 
Protein GI145355716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.114717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCA CGAGGAATAA ATCCTCCGCC GCCGACGCGT CGTCGTCGAC GCAGAGCGAT 
GAGAATTCGA CGGCGATCAA CGTCGGGCCG GTGCGCCTGA AACTCCCGAT GAAGATTCGA
TTCGGAAACG ACGCCGCCGA GCTCGAACGA CGGCGACAGG CGAACAGCAA CCCGCTGGCG
AAGATTCGAG GCTCGATGGC GGGCGTCGGA CGGTCGATCA AGGGCGTGGG GAATCTGCAG
CAGACGCTCA TGACGAACAT GATGGTGAAG GTCATCGCGG GGGTGTCGGG AACGCTGAGC
GGGTTGTTGC TCGCGGGATT GGCGTATAAG GTGGTGGGAG GATATCAAGA TGAGATAAAA
GAGGCGAGGC GGGAGGTGCA GCGGCAACAC CAGGAGAGGA AGGCGCGATT GGCGCAGGTG
AGACGATTGC TGAGCGGACC GCTGCGGGCG GCGGCGAAAG ATTTGAGAAA CAGATTGGAG
TTTATATTAA AGGTGCCGCC GAGACGTTCG AGCGGGGAAC CGCCGAAGAT TCGGGCGAAT
TATTTTGCGG CGCATTATCC CGATAATCCC AACGAAGCGG TGAATTCGAC ATTGTTTCGG
TTGTGTCGGT ATTTGCACTG GGTCGAGCAG TTTCAACGCG GGGTGCAGTT GGAAGGCGTG
AGCGAGCAGG ACACGTGGCA GTTCGCGTTG GATCAACAGC TTGATCGCGT GGCGATGGAG
TTGGAGGTGA GCAACGAGCG CTACGACGCA ACTGTACCGA CAGAGCGTTT GACTGAGGTT
TTCGCGCTCA TACACGTTCG TGAGGTGGAG AAGGAGAAGC GAGTCGAGGG CGACGGCGCT
GACGACGGCG GAGACGAAGG TGAAAAGTTA GCGAGTAAAC GGTCTATTTT TCGCCGAATC
GATTCCTCAT TGAATGAGAA AACGACGGCA ATGGAACCTT TAGAGGCTGC GGATTCGGCA
CCGAAGCGTC GCGTCGGACT CCTCAGCGCA GAGCCTCAGG AACGTCTCAG TCGATTTCCG
ATGCGCTTGT TTCGCGACAC GCAAGTCGCA CTGGCGGAGG TTTTTGGTAA GCTCCACACA
CTTGAATCCG GCGCTGGTCA GCCTCAACAT GAAGGTAAGG TAAACCCGCA CATGTTGTAC
ACAGAGTTCG TCATGAAACT CGAAGAGGCG CAAATGCTCT ACGAGCGCAC CGTGGAAGAA
CAAGCCTCCG AAGGTCTCGT TGATGCAGCC ACAGTCTTGG TCGCGCAGCA AGAAAATCTC
CAAGCCGATC CGTGGTTTAG ATGGATGCTT CCGCTGCAGC TTCAAATTCG ACGCTTGGCC
ATGCTACAGT CCCAGACGTC CAAGCTGTTA ACGAGGAAGG AGGCTCGCGA ACTCCTCGCC
GCGAGGGCAC GTTTGCGCGG CGTCCTCGAC GGCTTGAACG GTTTACTTGA CGTGCTCGAC
AGACGATTGG ACGATCCGTT GTTCAACAAG CCCAAACACA ATTTAAAGCA AAAGCACTTG
GCGACGGCTA AAATCGCAAC GAAGAAGGTA AAGTTGGAGG CGTTGAAGCG CGAAAAGTCA
CTGGCGCGAT GGAACAAGTT GAAACAAGCG ATCCCTTACG TCGCAAAGTA TCGCCGCCTT
CCACCTCCAC CTGCGAGCAA GAGATATATC CGTTTAGTGA CAGGAGATGA GTTACTGGCG
TTCGTTCGAC GGTATAAAGC GAAAGCCGTG GCGGGCGTCG TCTCTGCGGT GAGCACCGCC
GTCGTGAGCA CTGTCATCTC GAAAGTTGTC CAGCATCAAA ACAAGCGGCC AAAAGCGGTT
GAAATCGTGA AAACCGAGAG CGAAAGCGCT GAAAGCGAAG GCACGACTAA GGAGAAAAAG
ACGAACGATG AAGCAATCGA AGGTGAATTC GCACCGCCCA CGAAGACGCG TCCTAGACTT
CGCAATAGTG TGAAAGTCAA GTGA
 
Protein sequence
MRFTRNKSSA ADASSSTQSD ENSTAINVGP VRLKLPMKIR FGNDAAELER RRQANSNPLA 
KIRGSMAGVG RSIKGVGNLQ QTLMTNMMVK VIAGVSGTLS GLLLAGLAYK VVGGYQDEIK
EARREVQRQH QERKARLAQV RRLLSGPLRA AAKDLRNRLE FILKVPPRRS SGEPPKIRAN
YFAAHYPDNP NEAVNSTLFR LCRYLHWVEQ FQRGVQLEGV SEQDTWQFAL DQQLDRVAME
LEVSNERYDA TVPTERLTEV FALIHVREVE KEKRVEGDGA DDGGDEGEKL ASKRSIFRRI
DSSLNEKTTA MEPLEAADSA PKRRVGLLSA EPQERLSRFP MRLFRDTQVA LAEVFGKLHT
LESGAGQPQH EGKVNPHMLY TEFVMKLEEA QMLYERTVEE QASEGLVDAA TVLVAQQENL
QADPWFRWML PLQLQIRRLA MLQSQTSKLL TRKEARELLA ARARLRGVLD GLNGLLDVLD
RRLDDPLFNK PKHNLKQKHL ATAKIATKKV KLEALKREKS LARWNKLKQA IPYVAKYRRL
PPPPASKRYI RLVTGDELLA FVRRYKAKAV AGVVSAVSTA VVSTVISKVV QHQNKRPKAV
EIVKTESESA ESEGTTKEKK TNDEAIEGEF APPTKTRPRL RNSVKVK