| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_18694 |
|---|
| Symbol | |
|---|
| ID | 5006283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009371 |
|---|
| Strand | + |
|---|
| Start bp | 186403 |
|---|
| End bp | 188796 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | |
|---|
| GC content | 68% |
|---|
| IMG OID | 640421704 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422120 |
|---|
| Protein GI | 145355763 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0344474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000276573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGT TCGCGCGCGA CGCGGTCGTC GCGCTGGACG CGGAGGCGGC GGCGCAGGCG
CGCGCGCACG CGGGCTGGGG CGGGACGAGC GGGACGGGAC GCGCGCGCGC GACGCGGGCG
CTCGAGGCGT ACGCGACGAT GGACGACGCG ATGGGCGACG AGGAAGAGGT CTGGGACGTC
AGGGGGGAGC GGGTGCCGGC GGAGGCGCCG CTGGTGATCT GCGTCGCGGG ACGGCTGGGG
GAGGCGGCGG CGAACGTGCG GCGGTGCGTG CGGGCGCGGC GACGCGCGAC GCGCGCGACG
GTGTTCGTCG GATGCGACGA GGGCGATGAG GCGCACGGGG CGTGCGTGGA GGCGCTGACG
GAGGCGTGTG AAAGGATTTT GAGCGACGCG GCGGCGGAAT TCGGGGAGAC GCCGACGGGG
AATCGTTCGG GGGTGGGACG GAACGAAGAA GGAGACGAAG ACGACGAAGA GGACTGGGGG
AGTTGGGGCG ACGAGGACGA GGCGAGAGAC GAGGCGCCGG TGGAGGACTC GAGGGAGGGG
ACGGGCGATG GGTGGAACGA TGCGCCGACG CCGACGTCGA AACAAGGGCG AAATCGCACC
GCCGCCGCGG ACGCCGTCGC GGGTCGGTTT TCGGTCAAGT TTTTCCCTCC TATGATGTAT
CGCGCGCTCG GCGACGGTGC GTTCACGCTT CCGCGAACGC GAACGATGGG GTTGGTGAAC
GATGCCGCGG CTGCGTTGAC GGGGGAGTCG AAAGAGAATC GCGTCATCGG GCATCACTTG
GCTGAAATCG CCGCGCACTG GGCGTTGGCG CCGGATTATT TCGCCCTCGG TCCGAACGCC
GAAGCCGTGT CGCGCGTCGC AGCGCAAGCG AAGACCGATC CCGTGGGCGT GGACACGACG
GTGAAACCAC GAACGGCGGC GATCATCGTC GTCGATCGCG AGGTGGACTT GATGACGCCG
AGCGTGAGTC GAGACGGTTG GCTCGAGCGC GTGTTGGAGA CGACGGACGA CGAAGACGCG
GCGTCTTCAT CGACCTACGT CGACCGCGTC ACGGCGACGT TGTCCCCGCT CTTGAGCGAT
GAAAATGTTC TCACGTTAGA TGAAGCTCTG TGCGCGAAGA CTGCGCGTGA TGGCGCTGTG
CACGTGCGGA AGTTGCTGCG CGAGGCGGCT CGCGTGGAAT CCGTCGCCGC GCCGGCGGCG
GATGGAAAGA GCGCGCGCGT CGTCGGTGCT GACGATATTC TTAGCTTAGT GCGAGCGCTG
GAGGTTGATC CTAGCGTTGC TTTGCGTCAT CGCGCGTTGA TTCAGCGCGC AAAGCTCACC
GCGCGGAGTT TGACGGATGA GAACGACATG AAGGCGAATA GGCAAATCAT CGCTTTGCAA
CGACTCACCG CCGCTGCGCT CGAGCGCCAA GCCACGGGCG TGTGCGCGAC GGTGGTAGAG
ATACTGAAAG TGATGTATTC TGCGGGAGGT ACCGCCGTAG GTCACCCGAG CGAGGCGCTG
GCGCTCGTCT TAGCGGCGTA TGTACTCGCG ACGGAGGCGA ACGTTCAAGC GCAGGCGCCG
ACGAACGCCG CGTCGCCGTT CACGGCGCAA GACGAGGCGT CCGTGCGCGA CGCACTTTTG
GGCGCACTAC TGGCGAGCGA TCTCGCCGAT GTGAAGAAGC AAGTTCCAAG TTTCAACGCC
AGTGCGCTCG AAGCGCTCGA AGCGCTTCAG AACGCGACCG CGGCCGCGGC CGCCGACGCG
ACGCCGACGC CCTCGAAAGA TGACGACGGT TGGGACGACG ACGACGACGA CGACTGGGGC
GACGATGAAT GGGGCAACTC TCCGACGGCG CCGAGTAAAT CCACGACGAC GAACGCGATG
ACGGCGATCG ACGATCCCGA ACTCGCCGCC GCCGCGCTCG AGGCGCGAGA CGCCGTCGAG
CGCGCGCTTC ACAACTTCGC CCTCGCCGCG CATCGCGGCC GCGCATCGCT CAAGCACAAC
ATCCCAGAGT CTAACTCACT CTACGCCAAC GGTCTACCCA ACTCCATCCT GCTCGACATC
ATCTCCCGCG TCAAGACGTC CGCCGACGAC GGCGGCGCGT GCGCCGATTT CGTCCACGTC
GCCGCCTCCC TCGGCGGCTT ACTCAAGCAC GCCGCCGCCA CCGCCACCGC ATCCATCGTC
ACCGGCGCCA TGGGTCGTCT CGGCAACCTC ATCAACAAGG TCACCGCCGC CCCCAAACCA
TCCGATCGCG ACGTCGTCGT CGTCTTCCTC CTCGGCGCCC TCTCCTCCGG CGAATTCGCC
GCCGCCCTCA CCGCGCGCGC CCCCGATCCC GCCGCCGCGC TCTTCGCCCG TCACAGGGAT
CGCGAGTTCA TCTTCGGCGC GCTCGACCTC GCGTCCGCGC GCGCCATCGC GTGA
|
|---|
| Protein sequence | MAPFARDAVV ALDAEAAAQA RAHAGWGGTS GTGRARATRA LEAYATMDDA MGDEEEVWDV
RGERVPAEAP LVICVAGRLG EAAANVRRCV RARRRATRAT VFVGCDEGDE AHGACVEALT
EACERILSDA AAEFGETPTG NRSGVGRNEE GDEDDEEDWG SWGDEDEARD EAPVEDSREG
TGDGWNDAPT PTSKQGRNRT AAADAVAGRF SVKFFPPMMY RALGDGAFTL PRTRTMGLVN
DAAAALTGES KENRVIGHHL AEIAAHWALA PDYFALGPNA EAVSRVAAQA KTDPVGVDTT
VKPRTAAIIV VDREVDLMTP SVSRDGWLER VLETTDDEDA ASSSTYVDRV TATLSPLLSD
ENVLTLDEAL CAKTARDGAV HVRKLLREAA RVESVAAPAA DGKSARVVGA DDILSLVRAL
EVDPSVALRH RALIQRAKLT ARSLTDENDM KANRQIIALQ RLTAAALERQ ATGVCATVVE
ILKVMYSAGG TAVGHPSEAL ALVLAAYVLA TEANVQAQAP TNAASPFTAQ DEASVRDALL
GALLASDLAD VKKQVPSFNA SALEALEALQ NATAAAAADA TPTPSKDDDG WDDDDDDDWG
DDEWGNSPTA PSKSTTTNAM TAIDDPELAA AALEARDAVE RALHNFALAA HRGRASLKHN
IPESNSLYAN GLPNSILLDI ISRVKTSADD GGACADFVHV AASLGGLLKH AAATATASIV
TGAMGRLGNL INKVTAAPKP SDRDVVVVFL LGALSSGEFA AALTARAPDP AAALFARHRD
REFIFGALDL ASARAIA
|
|---|
| |