Gene OSTLU_6100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_6100 
Symbol 
ID5005907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp213528 
End bp214286 
Gene Length759 bp 
Protein Length253 aa 
Translation table 
GC content65% 
IMG OID640421328 
Productpredicted protein 
Protein accessionXP_001421878 
Protein GI145355251 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.00681545 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.399309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCGCCGTCG TCGTGTTTTT GCACGGCATC GGCGAACACG CCACGCGCTA CTCGAACCTG 
TTTAAACGAC TCACGAGCGC CGGTCTGCGC GTCGTGACGT ACGATTGCGT CGGACACGGC
GCGTCCGAGG GCTTGCCCGG ATACTTCGAA CAGTTCGAGG ACGTCGTGGA GGACGCGCGC
GGGTTTTGTG AGATGACGCG GGCGCGGCGA GCGGGACGCG AACCGCTGGT GCTGTGCGGA
CAGTCGTTCG GGGGACTCGT CGCGGCGACG GTCGCGGCGA ACGACGCTCG AGCGAACGCG
CGGTTGATCG ATGGTTTAGT GCTCACGGCG GCGAGCATCG ACGTGAAGTG GAACGCGGTG
CTGAGGGCGC AGGCGGCGAT GGGGGCGCTG TTGGCGAGAG GGGCGCCGCG CGCGCGTTTG
GTGCCGGCGG TGCGGTTGGA AGACATGTCG AACGATGCGG CGACTTTAGA GTCGTACGCC
ACGGATCCGT ACGTGCAGTT AGGACCGGTG CGTTGTCGCA CGGCGTATGA GATCCTGCGC
GGGTTCAAGG CGCTCAGAGC GAGATACGGA GAGTTGAGGT GTCCGCTCTT GGCGCTGCAC
GGCGCCGAGG ACGCGTGCGC GGATAAAACC GCGAGCGAGC GCCTCGTGTG CGAGGCATCG
AGCGCGGTGA AGCAATACGT AGAGTTACCG GGGATGCACC ACTTGATTCT TCAGGAACCG
GGAAGCGGGA CGGTGCTGAA TCGAATAGTA GAGTTTGTC
 
Protein sequence
RAVVVFLHGI GEHATRYSNL FKRLTSAGLR VVTYDCVGHG ASEGLPGYFE QFEDVVEDAR 
GFCEMTRARR AGREPLVLCG QSFGGLVAAT VAANDARANA RLIDGLVLTA ASIDVKWNAV
LRAQAAMGAL LARGAPRARL VPAVRLEDMS NDAATLESYA TDPYVQLGPV RCRTAYEILR
GFKALRARYG ELRCPLLALH GAEDACADKT ASERLVCEAS SAVKQYVELP GMHHLILQEP
GSGTVLNRIV EFV