| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_51641 |
|---|
| Symbol | |
|---|
| ID | 5005872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009370 |
|---|
| Strand | + |
|---|
| Start bp | 114341 |
|---|
| End bp | 116153 |
|---|
| Gene Length | 1813 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640421293 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421843 |
|---|
| Protein GI | 145355177 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.241207 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGA GCAAGCGCGC CAAGGTGGTG TCCCTGACGC AAACCAAGAA GAAGGACCGC
GAGTGGAAGT CAACGCTCAT CGAACGCGTG CGCGACGCGC TGAGCGAAAG ATCGTCCGTG
TACGTGTTTA AATACGAAAA CATGCGGAAC GGAACGTTCA AAGAGATGCG GGCGGCGACG
GAGGCGACGA CGACGTTCTT CGTGGGGTCG AATAAAGTAC TGCGAGTGGC GCTGGGGCGA
GACGCGGAGA GCGAGGCGAG CGAGGGCGCG GCGACGCTTG GAGCGCGCGT GAAGGGCGAT
TGCGGCGTGA TGTTTACTAA TTTATCCCGA GAAGACGTTG AGAGCGTGTT TGAAAGGTTT
GCGGTGAAGG ATTACGCGAG AACCGGGGCG TTGGCTAGAG AGACGGTGAC GGTGGAGGCG
GGACCGGTGC ACGGTCCGAG CGGGGCGCTC ATGGAACACA CACTCGAGCC GACGCTGCGC
AAGAATGGGA TGCCGACGAA ACTGAATCGT GGAGTGATTG AGTTGGAGGC CAATCACACG
CTTTGTAAGG AAGGACAACA CATCTCTCCG CAAGGGGCGA TTTTGTTGCG ATTGTTTGGG
CACGAGTTGG CCGAATTCAG GTGTCGTCTG ACGTGTGGCT TGGTGAACGG CGAGCTCGAG
GTGTACGAGG AAGATGATGA AGGCGACGAC GGCGATGATG GACCCATCGA CCGATTTGCG
CACGACGGCA TCACGGATTC CATGATGCTT CCTCCGGGAG TCAAGTAGAC TGACGCGTAC
CTTCGTAATA AACACAACGT AGTTCAAATC GACAAACGAC GTTCATCTCT ACAAGGCATC
ACTGCCGCTA TCGCTATAGT ACTTTTCAAC AACCTCACGC ACAAACCAGT CCAGCGAGAG
TTGCATGTGT CTCGCGGCCG GCACGAGTCG CGCCTCCAGT CGACCGTCGG CGTCGAGCGC
CGCCAAGCCA AGACTCTCGT ACACGACGTC GTTCCTATCG TACGGGATTA TTTCCGATCT
GTTACTTCCG CCGACCACTC GCGATCCAAA CCACGAACTT TCTTTCGGGA ACACCATGTC
ATCGAATTCG AACATGAACA TTACGAATCG CTCCAACGAC GTCAACGCCT CGCGCCGAGA
CGCTCCGTCT CTCTCGTTCG CGGTCCCCTC GTTGTTCACC CACGGCAAGA ACGCGTTCGT
CTCCAAATAG CGCTGGTATT TTGCGTTCGT GGACGTATCC CGAAAGTACT GCGCCTGCAC
GATGCGTCGC CGCGCGAAAT CGCTCGCCGA TAACGCGCTC GCCATCGCGT TCATCGCTCG
ACACGCGCGC GAAATCGTCG CCCAATCCCC TCCGCATCCC GGCAACGCAT CCACGCCCAA
ATGCTGCGCC CCAAACGTCA CCAACGTCGT AAACTTTACC CCGTCGCACG TCTCCACGAG
CGCTCTCGCG AACTGCCCTC CCTGCGAGAA CCCGAGCGCG TGCGTTCGCG TCGTCCCGCT
CGCTCGCCGC GTCTCGTCCC CGACCACCGC CTCGCACACC GCGCTCACCT GCGCCGCGAC
GTCGCCGACG TACGAGCTGT ATCGATCCCC ACCGCCACCA TCGATTCGCA CGCTTCGCGC
GCACGCGCTC GGGCGTCGCG CGAGCGCCAG CGCGAGTTCG TCCAAGCCTT CGCCCGTGTC
TCCCATCCCG TGCCAGAGGT AAAACCAATC GCGCGTCGTC TCGTCGCACG CGCCGCGCGA
GACGAAGCTC GCGCGCGGCG TCGTCGACGC GAGCGCGCCG AGCGCGAGCG CGCCGAGCGC
GCGCATGGAC GCG
|
|---|
| Protein sequence | MPKSKRAKVV SLTQTKKKDR EWKSTLIERV RDALSERSSV YVFKYENMRN GTFKEMRAAT
EATTTFFVGS NKVLRVALGR DAESEASEGA ATLGARVKGD CGVMFTNLSR EDVESVFERF
AVKDYARTGA LARETVTVEA GPVHGPSGAL MEHTLEPTLR KNGMPTKLNR GVIELEANHT
LCKEGQHISP QGAILLRLFG HELAEFRCRL TCGLVNGELE VYEEDDEGDD GDDGPIDRFA
HDGITDSMML PPGVK
|
|---|
| |