| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_37691 |
|---|
| Symbol | |
|---|
| ID | 5006074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009370 |
|---|
| Strand | - |
|---|
| Start bp | 310752 |
|---|
| End bp | 312827 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640421495 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422034 |
|---|
| Protein GI | 145355574 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.556949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0104163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG AACGCCTGGA GAAAAGCAAG GATAAGAAGC GAGGGAAAAA AGGTAAGGGG
CATCGTCGCA AGCGGAAGGG TGACCGAGAC AGCGACAGTG AGAGTTTGGA TGAGGATGAG
TTTGGACGAA CGACGAGCGC GAAGGCGTTT GCGCAAATGA CGTCGCCTCG CTCGGTGAAG
TTGTCGGATT TAGGCGGGAT CGAGGACTCG CTGAAGGACA TCAAGGAGCT CATACTGTGC
CCTTTGATGC ATCCCGAGTT GTACGCATGG CTCGGGGTCG ATCCGCCGCG CGGGGTGTTG
CTTCACGGCC CGCCGGGTTG CGGCAAGACG ACGTTGGCGC ACGCCATCGC GCAAGAGGCG
AAAGTGCCCT TCTTCTCCAT AGCGGCCACG GAGATTGTGA GTGGAATGAG TGGCGAGTCT
GAAGCGAAGA TACGTGAGTT GTTCCAGTCC GCCGCCGCGC ACGCGCCGTC GCTGATTTTC
ATCGACGAGA TCGACGCAAT CGTCCCGAAG CGCGAGAGCG CGCAGCGAGA GATGGAACGT
CGAATTGTCG CCCAGCTGTT AGCGTCCATG GACGATCTTC AATCAACAAT CGATGGCACG
GACGAGGTGG ATCGACTAGC GCGGTGTCGT CGCCACGTCA CCGTCATCGG CGCCACGAAT
AGACCGGACG GTATGGACGC CGCGCTTCGT CGCGCCGGAC GCTTTGATCG CGAAATCATG
CTCGGCATTC CAGACGAAGC CGCGCGAGAG CGCATTTTGC GAGTGCAGGC GACCAAGCTT
CGCTTGAATG GAGATTTAGA CTTGCGCGAA ATCGCAAAGA AAACGCCCGG CTATGTCGGC
GCGGATTTAT CGGCGTTGGC CAAGGAAGCC GCCGCGTCGG CGGTCACGCG CATCTTTAAA
AAGCTCGAGG ACGAGGAAAG GGCGAGCGCG GATGTGACGA TGGACGAGGG TGTCGCGCCC
GCACTGGGGG GGGACACTCG TCTCGCGACT GGTCGCTTAG CGGATCCGCG TCCGCTCACC
GAGGACGAAC TCGAGGATCT AGCAATCACC ATGGAAGATT TCTCCCTCGC GCTCACGCGC
GTGCAACCGT CGGCGCAACG CGAAGGTTTC ACCACGACGC CGAACGTGAC TTGGGACGAC
GTTGGCTCGC TCACAGAAAT TCGCGAAGAG TTGAAGTTCT CCATTGCTGA GCCCATCGCT
CATCCCGAGC GATTCCAAGC GATGGGTTTG AACATCTCTA CGGGCGTCTT GCTCTACGGC
CCACCGGGGT GCGGCAAAAC GCTCGTCGCC AAGGCGACGG CGAACGAGGC GATGGCGAAT
TTCATATCCA TCAAAGGTCC AGAGTTATTA AATAAGTACG TCGGTGAGAG CGAGCGCGCG
GTGCGGACGC TGTTCCAGCG CGCACGAAGT GCGAGCCCGT GCGTGTTATT CTTTGACGAG
ATGGATTCTC TGGCGCCGCG TCGCGGAAGC GGCGGCGACA ACACCTCAGC CGAGCGCGTC
GTGAACCAAC TTCTCACCGA GATGGACGGT CTCGAAGCGC GAAACGCGAC GTTCTTGATC
GCGGCGACGA ACCGACCCGA CATGATCGAT CCAGCGATGC TGCGTCCCGG GCGCTTGGAC
AAGCTCTTGT ACGTTCCGTT GCCGCCGCCG GACGGCCGAG TCGCCATCTT GAAGACGCTC
ACGCGCCGAA CGCCCATCGC ACCAGACGTA CGCGTGGATC AAATCGCGCT CGGTCGATCG
TGCGAAGGCT TCAGCGGCGC CGACTTGGCG GCGCTCGTGC GCGAAGCGTG CGTGGCGGCG
TTGAAATCGA TGACGCTCGA ATCGACGCCG ACGGTGACGA CGAAGCACTT CGAAGAGGCG
TTCACGAAGG TGCAACCCTC GGTGAGCAAG TCGGATCACG CGCGTTACGA TGAATTGCGT
CGAAAGCTCC GTCGCGAGCG CGGGACGATC AACAGCGCGC GCCGCTCTTC CTCCGCCGAA
AATCTCGCCG TCGAGCCCGC GTCCAACAAG CGCGTTCGCC CCGGCGACGA CGACGACCGC
GACGACCGCG ACGCGCCCGA ATTAGCCACC TCTTAG
|
|---|
| Protein sequence | MKIERLEKSK DKKRGKKGKG HRRKRKGDRD SDSESLDEDE FGRTTSAKAF AQMTSPRSVK
LSDLGGIEDS LKDIKELILC PLMHPELYAW LGVDPPRGVL LHGPPGCGKT TLAHAIAQEA
KVPFFSIAAT EIVSGMSGES EAKIRELFQS AAAHAPSLIF IDEIDAIVPK RESAQREMER
RIVAQLLASM DDLQSTIDGT DEVDRLARCR RHVTVIGATN RPDGMDAALR RAGRFDREIM
LGIPDEAARE RILRVQATKL RLNGDLDLRE IAKKTPGYVG ADLSALAKEA AASAVTRIFK
KLEDEERASA DVTMDEGVAP ALGGDTRLAT GRLADPRPLT EDELEDLAIT MEDFSLALTR
VQPSAQREGF TTTPNVTWDD VGSLTEIREE LKFSIAEPIA HPERFQAMGL NISTGVLLYG
PPGCGKTLVA KATANEAMAN FISIKGPELL NKYVGESERA VRTLFQRARS ASPCVLFFDE
MDSLAPRRGS GGDNTSAERV VNQLLTEMDG LEARNATFLI AATNRPDMID PAMLRPGRLD
KLLYVPLPPP DGRVAILKTL TRRTPIAPDV RVDQIALGRS CEGFSGADLA ALVREACVAA
LKSMTLESTP TVTTKHFEEA FTKVQPSVSK SDHARYDELR RKLRRERGTI NSARRSSSAE
NLAVEPASNK RVRPGDDDDR DDRDAPELAT S
|
|---|
| |