Gene OSTLU_28180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28180 
Symbol 
ID5006093 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp379738 
End bp380720 
Gene Length983 bp 
Protein Length271 aa 
Translation table 
GC content64% 
IMG OID640421514 
ProductMC family transporter 
Protein accessionXP_001422053 
Protein GI145355613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00310343 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
CGCGGTCGTC ATGGCGCGCG TCCCGCTGTC GGACGCGGAG AATCTCGCCG TGGGCGCGTT 
CGGGGGGATC GTGGAGACGT GCGTGCAGAG TGCGTGCGAC GATCGAGGCG AGGCGACGGC
GCGAGACGCG CGATGATGGT CGAGTGACGC GATGTGATTA ATGTAATGGA TAACGGCGGT
CGCGCGATGT GACGGATGAC GACGACGGCG CGGAGACTGA CGGGACCGCG ATCGAATCGC
GCGCAGTGCC GCTGATCACG TTTAAGATCT GCGTGCAGGA CTCGAGAGCG CTGCCGCGGT
CGATCGCGGG ATGGTACCGC GGCGTCTTCG CGAACGCGGC GTCGCTGGCG CCCATCACCG
CGGCGCAGGT GGCGGTGAAT GGGGCGATCG AGCGCGTCAT CACGAACGGT GAGCGAGGAA
TGAGCGACGC GGAGCAAATT GGATGCGCCA TGGCGGCGGG GGCGGTGTCG AGCGCGCTGT
ACTCGCCGGT GGATTTGACG GTGATTCAAC AGCAAAAGAT GGGCCTCGGT CCGGGGGGGA
CGGTGGCCGC CGTCGTGAAA CAAGGAGGTC TCGCGAAGAT GTGGCGAGGG ACGGTGTCGT
GCGCGGCGCG CGAGAGCATC TACACCGCGG GATACCTCGG TCTCGGACCG GTGCTGACGA
ACAAGATCAA GGAAGCGCAA CCGAATTTGG GCGATTTCGC CTCGAGCGTC CTGGGCGCGT
CGCTCGCGGG CACCTTCGCC GCGGGCCTCA CGCACCCGAT CGACACGTCG AAGACGCTCA
TGCAGAGCGA TTTGAGCGGC TCCAAATTCA CCTCCGCCAC GCACGCTCTG TCTGAAACGT
ACAAAACGGG CGGTATTCGC GCGTTATACA AGGGTGGTTT CGCGCGCACC GTGCGCATCT
GCGGCGCGTT TTTCATCGTC GGCAACATTC GCGAATACGC CGTCAACTAC AAGAACGCCA
ACTTGACCGC GGACGAGACG TAA
 
Protein sequence
MARVPLSDAE NLAVGAFGGI VETCVQMPLI TFKICVQDSR ALPRSIAGWY RGVFANAASL 
APITAAQVAV NGAIERVITN GERGMSDAEQ IGCAMAAGAV SSALYSPVDL TVIQQQKMGL
GPGGTVAAVV KQGGLAKMWR GTVSCAARES IYTAGYLGLG PVLTNKIKEA QPNLGDFASS
VLGASLAGTF AAGLTHPIDT SKTLMQSDLS GSKFTSATHA LSETYKTGGI RALYKGGFAR
TVRICGAFFI VGNIREYAVN YKNANLTADE T