Gene OSTLU_28160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28160 
Symbol 
ID5006084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp345895 
End bp347462 
Gene Length1568 bp 
Protein Length467 aa 
Translation table 
GC content60% 
IMG OID640421505 
Productpredicted protein 
Protein accessionXP_001421912 
Protein GI145355321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.522329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0147505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GGCGACAAAG ACGCGTCCGC GGACGACGCG CGCGAGGCTC TCGGGCGACG CGAGAGGCGC 
GCGCGCGAGT CGAACGGTGG CGCGGAGGCG TCGACGAGCG CGCGCGGGAT GAAGACGGCG
CGCGCGGTGG TGGTGGGGAC GTTGGCGGCG GGGGCGATCG CGGCGGGCGT CGCGGCGTTC
GCGGCGTCGC CGCGCGCGGC GTCGATGACG GCCGATCGCG CGTTCGCGTC GCTCGGTGAG
CGAGGAATGG CGATGTTGGG CTCGAGCGAG GGCGCGGGTC GCGACGCGAG ACCGGTGCCG
GTGCTGTCGA AACGATTTCC GGGATACGCG GCGCCGTTTA GCGGACGTTT CGAACGCATC
GGCGAGTGGC CCGAGCACTG GTTGGTGAAG TGCTCGAAGC ACGTGGTGTG CGAGCAATCA
CACTTGGGAG CGTTTTTGGG GTCTCGTGAC GCGCCCGCGC CGTATGCTAA CCCGCTCGGG
CACGGGCTGC CGCGTGGATA CGTGCGGCCA GACCAGGCGC GCATAAACGA GTTCATCTCG
ACGTGGGACA GCAACGCTAG ACAGGCGCAC GGGGGGGTGT ATGAGCTGCC GCAAGCTGGC
AAGGCTAAAA TGGTCGCGAT GGCGCATAAT TCTGCGTACT TTTACAACTT TGTGCACGTG
CCAAAGGCGG GCGGGTCGTA TTTTTCCATC ACCGTCTTGA TGGAAGCCCT GGAGCGCAGC
GGTGAGCATC ACGGGTATCC GTACAAACTC ACGCACGAGC CCGTATCGCA CTGGATCACG
CTTCCACAGG TGGATCTTAC GCAGACAAAC GTGAAGGAGA CGTATACACA TTTCCAGGAA
GGGAAGCCGG AGGGCATTTT TGGACCCGAA AATACCAAAC AAATGTATAA AGAAGGCAAG
CGGATGTTCG GAAAGGGCCA GTTCGGCATG GGACTGTGCG GAGTTATTCA CGCACCGTGC
GTGTACTTGA CTGTGTTGCG CGATCCGGTG GAACGTTACT TGAGTCATTA CAAGTACTCG
TGCTTGGCCG GGTCTGAGGG CGCCGCGCAG TGGTTACCCG AGTGGAAAGA ACTCGACCGT
TGCCCGTTGG ATCCGATCGA GTTCATGGAC TACCTCGGAC CAAACCTGGA CTGGACGATC
GAGCTCGCCC CTGGCGCGAA GAACGCGCAA GAGCGCATGG AGACAGCCAA AAGAAATCTC
GACAGTAACT GCTTGCGATA CCTCATACTC GAGAAGTACG AAGACGGGTT GGATAAACTC
GGCGCGACGT ACGCCGATTT CTTATTTTTG AACAAAGAGC CCGCGAAAGA AAGGCACAAA
AAAAAAAACG AAAAGGCCAA AAACGCCGGG CACGGCGTGA GCGAAGGCGA GCAAGACAGG
TTTGACATCT ACATGAAGAA CCAAACCATC GTCGACGCCA TCGCCGCGCG TCACGCAAAG
ATGAAGGAAG TGTACGACTA CGCGGTCGCC AAATACGAAG CCAACTGGGC GCGCGCGCCG
GGGAGCTGCT AATCAGATCC CAAAATTAGA ACCATAACTG TAACATCAAC GCGCATCAAC
GCGCATCA
 
Protein sequence
MKTARAVVVG TLAAGAIAAG VAAFAASPRA ASMTADRAFA SLGERGMAML GSSEGAGRDA 
RPVPVLSKRF PGYAAPFSGR FERIGEWPEH WLVKCSKHVV CEQSHLGAFL GSRDAPAPYA
NPLGHGLPRG YVRPDQARIN EFISTWDSNA RQAHGGVYEL PQAGKAKMVA MAHNSAYFYN
FVHVPKAGGS YFSITVLMEA LERSGEHHGY PYKLTHEPVS HWITLPQVDL TQTNVKETYT
HFQEGKPEGI FGPENTKQMY KEGKRMFGKG QFGMGLCGVI HAPCVYLTVL RDPVERYLSH
YKYSCLAGSE GAAQWLPEWK ELDRCPLDPI EFMDYLGPNL DWTIELAPGA KNAQERMETA
KRNLDSNCLR YLILEKYEDG LDKLGATYAD FLFLNKEPAK ERHKKKNEKA KNAGHGVSEG
EQDRFDIYMK NQTIVDAIAA RHAKMKEVYD YAVAKYEANW ARAPGSC