Gene OSTLU_28144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28144 
SymbolFBP16-4 
ID5005935 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp309854 
End bp310511 
Gene Length658 bp 
Protein Length191 aa 
Translation table 
GC content70% 
IMG OID640421356 
Productpeptidyl-prolyl cis-trans isomerase, FKBP-type 
Protein accessionXP_001422033 
Protein GI145355572 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00736987 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGACGC GGCCGCGCGC GTCCGCGTCG GCATCGAGCG ACGTCGCGCG ACGCCGCGAC 
GCGCTCGTCG GCGCCGCGCT GGCGCTCGTC GCGACGCCGG GCGCGGCGCG CGCGAAACTC
TCGGGAGGCG TCACGGGAGG GGTGCCGATC GAGAACTTTC AGCCGGTGCG CGAGACGACG
ACGACGACGA ACGCCGCGAA CGAACGCGAC GACGACGGCG AGACTGACGA CGCGCGACGC
GACGCAGATC CCGGGAACGA ACCCGCCGAT ACTGTACTAC GATTTACAGG GCGCGAGCGG
CGCGACGGGG GGCGTGCCGA AGGGGGCGCG CGTGGCGGTG CACTACGACT TGAAGTTTCG
GTCGGTGACG GTGGGGACGT CGAGGCAGGG CGCGGGCGTC ACGGGAGGGA CGCCGATCGG
ATTCACCGTC GGGCAACCCG CGGGAGAGCC GGGAGGACCG TTCATACAGG CGTTTAACGA
GGGGATCAAG GGCATGGGCG TCGGGACGGT GCGACGGATG ATCGTGCCGC CGGAGTACGC
GTACGGGCCG AACGAGGTCA TGGAGATCCC GGCGAACGGG ACGGTGACGC TCGACTTGGA
GCTTTTGAGC GTGGCGAAGG ATCCCATCAC GCGCGGCGTC AAGGGGGCGC AGGAGTAG
 
Protein sequence
MKTRPRASAS ASSDVARRRD ALVGAALALV ATPGAARAKL SGGVTGGVPI ENFQPIPGTN 
PPILYYDLQG ASGATGGVPK GARVAVHYDL KFRSVTVGTS RQGAGVTGGT PIGFTVGQPA
GEPGGPFIQA FNEGIKGMGV GTVRRMIVPP EYAYGPNEVM EIPANGTVTL DLELLSVAKD
PITRGVKGAQ E