Gene OSTLU_28138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28138 
SymbolCYN22 
ID5006070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp302219 
End bp302764 
Gene Length546 bp 
Protein Length181 aa 
Translation table 
GC content64% 
IMG OID640421491 
ProductPeptidyl-prolyl cis-trans isomerase, cyclophilin-type 
Protein accessionXP_001422030 
Protein GI145355565 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00013797 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.201845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGGC ACGATCGCGC GCGCGTCGAC TCGAATCCGG TGGTTTTCTT CGACGTGACG 
ATCGGCGGCG CGAGCGCGGG GCGGGTGACG TTCGAGCTCT TCGCCGACGT CGCGCCGAAG
ACGTGCGAAA ACTTCAGGCA GATGTGCGCG GGGGAGTTTC GCTCGCGCGA GGGCGCGCCG
CGAGGGTACA AGGGGTGCGC GTTTCATCGC GTGATCAAGG ATTTCATGAT TCAGGGCGGG
GACTTCGTCA ACGGCGACGG CACGGGGTGC GCGTCGATAT ACGGATCGAA GTTCGACGAC
GAGGCGTTCG TCGGCAGGCA CACGGGTGCG GGGTTGCTGT CGAGCGCGAA CAGCGGGCCG
GACACGAACG GGTGCCAGTT CTTCGTGACG TGCGCGAAGA CGGAGTGGTT GGACGATAAG
CACGTGGTGT TCGGACGCGT GCTGGGAGAC GGGATGTTGG TGATTAGAAA GGTGGAGAAC
GTGGCGACGG GGGGCGGGAA TAAGCCCAAG CTGCCGTGCG TGATCGCGGA GTGCGGCGAG
ATGTAG
 
Protein sequence
MSWHDRARVD SNPVVFFDVT IGGASAGRVT FELFADVAPK TCENFRQMCA GEFRSREGAP 
RGYKGCAFHR VIKDFMIQGG DFVNGDGTGC ASIYGSKFDD EAFVGRHTGA GLLSSANSGP
DTNGCQFFVT CAKTEWLDDK HVVFGRVLGD GMLVIRKVEN VATGGGNKPK LPCVIAECGE
M