Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28087 |
Symbol | |
ID | 5005908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009370 |
Strand | + |
Start bp | 214504 |
End bp | 216016 |
Gene Length | 1513 bp |
Protein Length | 465 aa |
Translation table | |
GC content | 64% |
IMG OID | 640421329 |
Product | predicted protein |
Protein accession | XP_001421879 |
Protein GI | 145355253 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000149848 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.278973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | CCGCCACTCG CGCGTCCCGC TCGCGTCGCG CCTCGCTCGC GCCGCACGTC GCGCGCGATC GCGAGTCGCT CGAAATGCCC GCCGCGAGGC GCGCGCGCGC GGCGCCCGCG CGCGCGCAGC GAAAACCAAC CACCGAGAAA GAATCCACCG CGCGCGACGA TGTCGACGCG AAACCCGACG ACGACGTCGC GGTGAAGCGC GAACGGCGCG CGGCGGACGC CGACGCCGTC GCGTCCGACG ACGAGTCGAC GCGGGCGACG AAACGGACGA AATCGAGCGA GACGGGGACG GGGACGGTTG GCGGCGGCGG CGACGCGTGC GACGACGATT TCAAGACGCT CGTGCGCATC GATAACAACG CGGGCAGAGT GATCGGTAAG GGTGGCGAAA ATGTCAAGTA CATCGAGAAC ACGTGCGGAT GCGTGGTTGA ATTTCGCCGC GATGAAGGCG TGGCGGTGGT TCGGCCGAAC GTCGTCGGCG CGGGCGGCGC GCGGCGAACG AGCGAGGAGA AGCGAGCGAG CACGCAACGC GCCAAGGCGC TGATCGAAGA GGTGGCGAAC ACGGGACAGA TCATGGAGAT GTTAACGGCG CACGTGCCGA GCGATGTCAA CGCCGGGATA CGGATCGATG TGAGCGTGGT GCCGGAAAGC GTCATTTCGG GGGACGACGA GGAGGAAATC GAAGTGGCGA TTCCGTGCCC GGGGAAAGAG GGTCGCGTGA TCGGTCGCGG CGCGGCGACG ATTCGAGAGA TAAGCGCGAG GAGCGGGGCG AGTTGTCACG TCGTTAAAGG TAGTGGCGTG TGCACGGCAA AAGGAAAGCG CAAGTGCGTG AGAATCGCGT ATCAAATGGT GCACGACACG CTGCAGCTGC AAGTAGATAG ATTCGCGGCG CCGAGCGCGC CGGCTGTGGC GCCACAGATG CAACCACATG CTTTGCCGAT ACAAGGTTTG CCTCAAGGCG CAGTGTTACT TCCGAATGGC ATGGCCATGG TGCCTCTGGC CGCGATGGGA CTCGCGGCGC CGGCGCCGAC CGCGGCGCCG GCGACGACTA TCGAGGTTCC TTGCGCCGGG AACGAGGGAC GAGTCGTCGG TAAGGGTGGT GAAATGATCA AACATTTACG CGCCGTAACG GCGTGTGGGG TTGATATTAA GAATAACAAA TCGCCGCACG CGGTGGTGGC GATTACTGGG CCGCTCGCGA ACGCGCAACT GTGCGCCTCG TACGTGCGCG AAGTCATGGA AATGGGCGAC ACTCGCGCGA CAGGGGGATT AAGCGGAGCG CCTCTACACG CGGCGCCGGC GAACACACCT CCGTTCATCG TGCCACAGCA GCAACAAGCG TATCAACACG CGCCGGTGAC GCCACATTAC GCGCCGGCGC CTCACGGAGC CGAGACGTGG GTACGATACT ACGACGCCGA AGGTAAGCCT TACGAGCACA ACCCGGTGAC GAACGAAACG CGTTGGGTGT GAGGACTTTG CGACGTGAGA CGAATGGATA ACTTTAGATT AGC
|
Protein sequence | MPAARRARAA PARAQRKPTT EKESTARDDV DAKPDDDVAV KRERRAADAD AVASDDESTR ATKRTKSSET GTGTVGGGGD ACDDDFKTLV RIDNNAGRVI GKGGENVKYI ENTCGCVVEF RRDEGVAVVR PNVVGAGGAR RTSEEKRAST QRAKALIEEV ANTGQIMEML TAHVPSDVNA GIRIDVSVVP ESVISGDDEE EIEVAIPCPG KEGRVIGRGA ATIREISARS GASCHVVKGS GVCTAKGKRK CVRIAYQMVH DTLQLQVDRF AAPSAPAVAP QMQPHALPIQ GLPQGAVLLP NGMAMVPLAA MGLAAPAPTA APATTIEVPC AGNEGRVVGK GGEMIKHLRA VTACGVDIKN NKSPHAVVAI TGPLANAQLC ASYVREVMEM GDTRATGGLS GAPLHAAPAN TPPFIVPQQQ QAYQHAPVTP HYAPAPHGAE TWVRYYDAEG KPYEHNPVTN ETRWV
|
| |