Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28058 |
Symbol | |
ID | 5005892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009370 |
Strand | - |
Start bp | 173647 |
End bp | 174996 |
Gene Length | 1350 bp |
Protein Length | 340 aa |
Translation table | |
GC content | 67% |
IMG OID | 640421313 |
Product | predicted protein |
Protein accession | XP_001421994 |
Protein GI | 145355490 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00100512 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0736685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | CTCGACGTCG CGGCGAATCG CGGGGGATCT GCGATGGCGC GCGCGGTCGC GCGCGCGATC GCGCCCGCGC GGTCGACCGC GCGCGACGAC GGCGCGCGCG CGACGACGGC GCGCGTCGCC GCGACGCGTC GTCGCGCGTC GCGCGCGCGG GGCGCGGTCG AACGCGCGGT GATTGCGGAC CGCGCGACGA CGACGACGAC GACGACGACG ACGACGCGCG CGCGCGGGAC GACGCGGACG CGCGCGATGC CGCACGCGGG CGACGCGGTG TGGTGGGCGG AGCAGGCGGC GACGTGCGGG GCGATCCTGT GCGCGTACGC GCGGATGACG AGTGACGGGG ACGACGCGGA CGAGGCGTGC CCGAAGTGCG AGGGGAGCGG ACGAACGGCG TGCTCGTGCA CGCGATGGAG CGGCGACGGC GAGGGATGCG GGTCGTGTGG ATACACGGGA GTGACGGCGT GTCCGGCGTG CAGGGGCGGA GGGCGCGCGG TGCGAGTGAC GGTGAAGATC GAGGCGCCGA GCGAGACGAG CGAGGGGGGA TTCGAACGGG ATAGGTCGAA CGCGACGGGG AGTAGGGCGA CGACGACGAC GACGACGACG CGCGCGCGCG CGCTGCGATG CGTCGCGGTG GAGGGTGGGA CAGATTACAG CGTGTCCACG ACGCCCGCGA TCGTGGATTC GACGGAATCG AAGGGACCGT CGGGCGGACG CGACGAGGAC GGCCCGAGCT CGAGCAAGGA CGACGATTTT TACGCGCAGT CTGGGGAGGC GATTCGAGTC CTTCGCGAGG ACTACCCGTA TTTGTTGACC AAAGAGCCTC GATGGACGAT CTACAGGGAC GATATCGGGC TGTTGGACGA GACGATGACG TTCGCGGGGC CGGGAAGAGA GGGACGAAAC GGCGTCATGG CGACGAACAT GTCCGAGTAC AAACGAGTGT TCAAGATCAT TCGTATCATC GCCGCCGTGT TGTTTTCGCA GAGCACGATG GAGGTGTCTC GCATTTGGTC CCCTTTGGGT TCGTCGGGCC TTCGAACGAT CCGCGTGCGC TGGAGCGTTC GCGGCAAGGT GAGACTCGTC GGCTCCATCG GCGCCGACGA GGCGAGGTTC GACGGAATCT CCGAGTACAA GCTCGATTCC AAGGGCTTCA TCTACGAGCA TAAAATCACC GATCTCGATT GGGACGTCGC GCAGCTTCGA GAACGCGCGG TGCAGATGAT GCGCGCGGCG CAGGGCGTGC AGCAGCCCAT CGGAAGCGGA GACTGGTGAT TGCGCGACTC GAGCGGCGCT CGAAAGTTGT CTTTTGTTGT ACGCATTGAA ATGTAATTTC AAACTCAATC TAATGCACCA
|
Protein sequence | MPHAGDAVWW AEQAATCGAI LCAYARMTSD GDDADEACPK CEGSGRTACS CTRWSGDGEG CGSCGYTGVT ACPACRGGGR AVRVTVKIEA PSETSEGGFE RDRSNATGSR ATTTTTTTRA RALRCVAVEG GTDYSVSTTP AIVDSTESKG PSGGRDEDGP SSSKDDDFYA QSGEAIRVLR EDYPYLLTKE PRWTIYRDDI GLLDETMTFA GPGREGRNGV MATNMSEYKR VFKIIRIIAA VLFSQSTMEV SRIWSPLGSS GLRTIRVRWS VRGKVRLVGS IGADEARFDG ISEYKLDSKG FIYEHKITDL DWDVAQLRER AVQMMRAAQG VQQPIGSGDW
|
| |