Gene OSTLU_28058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28058 
Symbol 
ID5005892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp173647 
End bp174996 
Gene Length1350 bp 
Protein Length340 aa 
Translation table 
GC content67% 
IMG OID640421313 
Productpredicted protein 
Protein accessionXP_001421994 
Protein GI145355490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00100512 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0736685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTCGACGTCG CGGCGAATCG CGGGGGATCT GCGATGGCGC GCGCGGTCGC GCGCGCGATC 
GCGCCCGCGC GGTCGACCGC GCGCGACGAC GGCGCGCGCG CGACGACGGC GCGCGTCGCC
GCGACGCGTC GTCGCGCGTC GCGCGCGCGG GGCGCGGTCG AACGCGCGGT GATTGCGGAC
CGCGCGACGA CGACGACGAC GACGACGACG ACGACGCGCG CGCGCGGGAC GACGCGGACG
CGCGCGATGC CGCACGCGGG CGACGCGGTG TGGTGGGCGG AGCAGGCGGC GACGTGCGGG
GCGATCCTGT GCGCGTACGC GCGGATGACG AGTGACGGGG ACGACGCGGA CGAGGCGTGC
CCGAAGTGCG AGGGGAGCGG ACGAACGGCG TGCTCGTGCA CGCGATGGAG CGGCGACGGC
GAGGGATGCG GGTCGTGTGG ATACACGGGA GTGACGGCGT GTCCGGCGTG CAGGGGCGGA
GGGCGCGCGG TGCGAGTGAC GGTGAAGATC GAGGCGCCGA GCGAGACGAG CGAGGGGGGA
TTCGAACGGG ATAGGTCGAA CGCGACGGGG AGTAGGGCGA CGACGACGAC GACGACGACG
CGCGCGCGCG CGCTGCGATG CGTCGCGGTG GAGGGTGGGA CAGATTACAG CGTGTCCACG
ACGCCCGCGA TCGTGGATTC GACGGAATCG AAGGGACCGT CGGGCGGACG CGACGAGGAC
GGCCCGAGCT CGAGCAAGGA CGACGATTTT TACGCGCAGT CTGGGGAGGC GATTCGAGTC
CTTCGCGAGG ACTACCCGTA TTTGTTGACC AAAGAGCCTC GATGGACGAT CTACAGGGAC
GATATCGGGC TGTTGGACGA GACGATGACG TTCGCGGGGC CGGGAAGAGA GGGACGAAAC
GGCGTCATGG CGACGAACAT GTCCGAGTAC AAACGAGTGT TCAAGATCAT TCGTATCATC
GCCGCCGTGT TGTTTTCGCA GAGCACGATG GAGGTGTCTC GCATTTGGTC CCCTTTGGGT
TCGTCGGGCC TTCGAACGAT CCGCGTGCGC TGGAGCGTTC GCGGCAAGGT GAGACTCGTC
GGCTCCATCG GCGCCGACGA GGCGAGGTTC GACGGAATCT CCGAGTACAA GCTCGATTCC
AAGGGCTTCA TCTACGAGCA TAAAATCACC GATCTCGATT GGGACGTCGC GCAGCTTCGA
GAACGCGCGG TGCAGATGAT GCGCGCGGCG CAGGGCGTGC AGCAGCCCAT CGGAAGCGGA
GACTGGTGAT TGCGCGACTC GAGCGGCGCT CGAAAGTTGT CTTTTGTTGT ACGCATTGAA
ATGTAATTTC AAACTCAATC TAATGCACCA
 
Protein sequence
MPHAGDAVWW AEQAATCGAI LCAYARMTSD GDDADEACPK CEGSGRTACS CTRWSGDGEG 
CGSCGYTGVT ACPACRGGGR AVRVTVKIEA PSETSEGGFE RDRSNATGSR ATTTTTTTRA
RALRCVAVEG GTDYSVSTTP AIVDSTESKG PSGGRDEDGP SSSKDDDFYA QSGEAIRVLR
EDYPYLLTKE PRWTIYRDDI GLLDETMTFA GPGREGRNGV MATNMSEYKR VFKIIRIIAA
VLFSQSTMEV SRIWSPLGSS GLRTIRVRWS VRGKVRLVGS IGADEARFDG ISEYKLDSKG
FIYEHKITDL DWDVAQLRER AVQMMRAAQG VQQPIGSGDW