| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28054 |
|---|
| Symbol | |
|---|
| ID | 5006032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009370 |
|---|
| Strand | - |
|---|
| Start bp | 168978 |
|---|
| End bp | 169683 |
|---|
| Gene Length | 706 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640421453 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421992 |
|---|
| Protein GI | 145355486 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5030] Clathrin adaptor complex, small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.066003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCCGACGCG CGGTCGGACG GGGGCGCGAC GGTGGCGGTG ATCGAGGACG GATCGCGGCG
CCGCGCGGGG TCCGACGATC GCGGCGCGAA CCTCGCGTCG GCGAACGAAA CGAAACGAAA
CGAAACGAAT CATTCATTCA CTGCGTTGAT TTGGGTGGTC AATCCATTGG TGTTGTCGGA
CGACGAGGAC GATGATCAAG GCGTTCATCG TGGTGAATAA CCACGCCATG GTGCGATTGT
GTAGATTTTA CGAACAGCTC GGGGTGGATA AACAGACGGA GCTGTGTCAG ACGGTGTACA
AGCTCGTGAC GGGGCGACCG GATCACCTGT GCTCGTTCGT GGACGACGAG AAGACGTTCG
GCCCGGACAC GAAGCTGGTG TACAGACACT TCGCGACGCT GTACTTTTGC ATCCTGAGCG
ATCGAAGCGA GAGCGAGCTG GCGATGCTGG ATCTGATTCA AGTCTACGTC GAAACCCTCG
ATCGGGTGTT CGAGAACGTG TGCGAATTGG ATTTGATTTT CAACTCTCCG AAGGCGTACA
CCGTGCTCGA CGAGACAATC GTCGGGGGGT TGGTGCTCGA GATCAACACG AATAAAATCT
TGAACGTGTA CGATCAGCTC ATGAAACTGG AGAAGATGCA CGGTTCGCTC ATGGATAAGA
TCGCCATCTC GTGATCGTAG TAATCTGTAA AACACTCCCT CGCTCG
|
|---|
| Protein sequence | MIKAFIVVNN HAMVRLCRFY EQLGVDKQTE LCQTVYKLVT GRPDHLCSFV DDEKTFGPDT
KLVYRHFATL YFCILSDRSE SELAMLDLIQ VYVETLDRVF ENVCELDLIF NSPKAYTVLD
ETIVGGLVLE INTNKILNVY DQLMKLEKMH GSLMDKIAIS
|
|---|
| |