Gene OSTLU_28008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28008 
Symbol 
ID5006011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp94733 
End bp95752 
Gene Length1020 bp 
Protein Length339 aa 
Translation table 
GC content65% 
IMG OID640421432 
Productpredicted protein 
Protein accessionXP_001421971 
Protein GI145355443 
COG category[R] General function prediction only 
COG ID[COG5273] Uncharacterized protein containing DHHC-type Zn finger 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.133273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGGT CGCCGGATTC CGAAATCGCC GCGCCGTCGC CTCGCGTGCA CGAGCGCTGG 
CCCGGAAACG AGACGTTCGC GTGCGATGGA CGATGCGTCG CCGGTCCGCG GCCGCGCGCG
GCGCTGTGCA CCGCGGCGCT GATCGCGGCG CCGTCGCTCG TGAATCTTCT GGTCGTCATC
GAACCGCTGT TGCGACGGAA ACTCGGCGCG TGGACGCTCG CGTGCGGCGT GGCGCTGCCG
GCGTGGTGCC TGGGATGGTT GGCGAAGACG GCGCTGACGG ATCCCGGAAT TCTGCCGCGA
TTGGCGCGCG ATGGGCGGAC GAGCTCGATG CGAGGGAAGA CGAGGGAGAC GACGGTGGCG
ACGACGGGAC GGACGACGAC GACGAGGTGG AACGACACGT GCGGGTACTT CCAACCGCCG
CGCGCGCATC ACTGCAGCGT GTGCAACGAT TGCGTGGAAA AGTTCGATCA TCACTGCCCG
TGGACGGGGA CGACGATCGG GAAGAGAAAT TATAGGGCGT TTTTGATGTT TACGTACGGG
ACGACGGCGC TGTGCGCGTT CACGATGACG ACGTGCGGAT ACAGCGTGAG CTATCGAGGG
ATGAAGAAAT CTGGGGCGGC GATCGCGGTG TTCTTCGTGG CGTTCGTGGC GTTCGTGTTC
GTGGGGGCGT TGAGTTGTTT TCACGCGTAT TTAGTGTCGA CGAATCAGAC GACGTACGAG
AATTTTAGAG ACGCGCACGG TTGGCGAGCG AATCCGTACA ACACCGGGAG CGTGTTGAAG
AATTGCTACG AGGTGTGGTT CGCGAAAATA GGGCCTCCGC GCGTGCGCTT CGACGCGCGA
GTGAGCGAGG ACGAGAGCGC GAAGACGTTC GCGAGGGAAA TCGCCGAGTC GGACGAAGCC
GCCGCGCGCG CCGCCGCCGC CGCGAGAGAT TCGGCGGTCG AAGCCGGCGT CGCCGGTCGC
GAGTCGGACG TCGAGTTACC AGTCATCGCA TCGCCGACGT CGCCGCGATC GTCGTCGTAG
 
Protein sequence
MSRSPDSEIA APSPRVHERW PGNETFACDG RCVAGPRPRA ALCTAALIAA PSLVNLLVVI 
EPLLRRKLGA WTLACGVALP AWCLGWLAKT ALTDPGILPR LARDGRTSSM RGKTRETTVA
TTGRTTTTRW NDTCGYFQPP RAHHCSVCND CVEKFDHHCP WTGTTIGKRN YRAFLMFTYG
TTALCAFTMT TCGYSVSYRG MKKSGAAIAV FFVAFVAFVF VGALSCFHAY LVSTNQTTYE
NFRDAHGWRA NPYNTGSVLK NCYEVWFAKI GPPRVRFDAR VSEDESAKTF AREIAESDEA
AARAAAAARD SAVEAGVAGR ESDVELPVIA SPTSPRSSS