Gene OSTLU_28006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28006 
Symbol 
ID5006009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp91670 
End bp92998 
Gene Length1329 bp 
Protein Length418 aa 
Translation table 
GC content65% 
IMG OID640421430 
Productpredicted protein 
Protein accessionXP_001421969 
Protein GI145355439 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.122244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCGACGCGCG CGCGATCGAC GCGAGCGCGC GCGAGCGCCG AAATCCACGC GCGCGCGAAC 
GATGGCGTCC GCGACCGTCA CCGCCGCGCC CGCGCGCGCG ACGCGCGCGA CGCGCCGTCG
CGATTCGTCG CGCTCGAGCG CGACGTCACC GCGCGCGACG TCGGCTCGAA CGCGCGCGCG
GGCGCGCGCG AGCTCGAGCT CGAGCGGCGC CCTGGACGCG CTGCTCGGCG CCACGATCAT
CGCACCGGGC GGCGACGCGA GCGTGCGCGC GAGCGTGCAA AAGTACTACG GCGAGACGCT
GAGCACGAGC GACGACTTGA AGACGAGCGC GTGCTGCACG CCGAGCGAAC AAATCCCGAA
AGCCGTGCGC GAGGCGCTGC GAGAGGTGCC GGATGAGGTC AAGGCGAAAT ACTACGGATG
CGGTAGTCCG ACGCCGATCG GGATCGATGG ACTGCGCGTG CTGGATTTGG GAAGCGGAAG
CGGACGAGAC TGTTACGTCG CGGCGAAGCT CGTCGGCGAA AACGGAAGCG TGTTGGGAGT
GGACATGACG GATGGACAGT TGGAGGTGGC GAGAAAATAC GTGGATGAAT ACTGCACGAA
GACGCTCGGG TACGCGAAGG CGAACATGCG ATTTGAGAAG GGAACCATTG AGGATTTGAA
AGCCGCGGGG GTGCCCGACG CGTCGGTGGA CATGATCATC AGCAACTGCG TCATCAATCT
GAGCCCCGAT AAGCCCGCGG TGTTGAGCGA GGCGTACCGC GTCTTGGCGA ACGGCGGCGA
GTTTTACTTC AGCGACGTGT ACTGCGACCG AAGACTTCAG GAAGATTTGC GCTCGCACGA
AATTTTACTC GGCGAGTGCC TCGGCGGCGC CATGTACGTC GAAGACTTCA AGCGTCTTTG
CCAAGCCGTC GGCTTTACCG ATCCGCGCGT TTTGGCCGGT CACGAGATCG AAGTGCGCGA
TCCCGCGCTC GCAGAACTTT TGGGCGAGGC CAAGTTCTAC TCCATCACCT ACCGCCTGTT
CAAGCTTCCC CCGGGTTGCT TGGAGACGCT CTGCGAAGAC TACGGCCAAT ACGCCGTGTA
CAACGGCGGC TTACCGGGCG CGCCGAACGC GTACCAACTC GACGACCATC ACCGATTCGA
AAAGAACAAA CCCATGCTCG TGTGCGGGAA CACGGGATCC ATGGTCGGCG AGACCTGGCT
CGGCAAGTAC TTCACCCTCG TCGGCGACCG CTCCACGCAC TACGGCTTGT TCGATTGCGG
TCCGTCGCCC GTCGCCGCCT CATCCAGCGC CGCCCCCGCC GGCGGCGCGT GCTGTTGACC
GCGCCCGAC
 
Protein sequence
MASATVTAAP ARATRATRRR DSSRSSATSP RATSARTRAR ARASSSSSGA LDALLGATII 
APGGDASVRA SVQKYYGETL STSDDLKTSA CCTPSEQIPK AVREALREVP DEVKAKYYGC
GSPTPIGIDG LRVLDLGSGS GRDCYVAAKL VGENGSVLGV DMTDGQLEVA RKYVDEYCTK
TLGYAKANMR FEKGTIEDLK AAGVPDASVD MIISNCVINL SPDKPAVLSE AYRVLANGGE
FYFSDVYCDR RLQEDLRSHE ILLGECLGGA MYVEDFKRLC QAVGFTDPRV LAGHEIEVRD
PALAELLGEA KFYSITYRLF KLPPGCLETL CEDYGQYAVY NGGLPGAPNA YQLDDHHRFE
KNKPMLVCGN TGSMVGETWL GKYFTLVGDR STHYGLFDCG PSPVAASSSA APAGGACC