Gene OSTLU_28003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28003 
Symbol 
ID5006127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp86313 
End bp88241 
Gene Length1929 bp 
Protein Length642 aa 
Translation table 
GC content61% 
IMG OID640421548 
Productpredicted protein 
Protein accessionXP_001421967 
Protein GI145355435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.49336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0385672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGC TGGAGCGCGC GCTCGAGCGC GCGCGCGCGC TGAACGTCGA TCTGGTGGAA 
CTGGCGGCCA GGATCGAGCG CGACGGGAGC GGGGCGACGG CGAGCGCGAG CGCGCGGGAG
GGGACGCTGC TGGACGCGCT GGACGCGCTG GCGAGGGGCG AGCGCGCGCT GGGCGAGGGG
GACCACGATC GCGCGGTGAC GGCGTACGAC GAGTGCCTGA AGAAATGCGT GAAAGCGTGG
ATGAACGGGC GCGCGGAGGT GTCGGCGCTG GTGGCGAACG CGTGCGGGAT GCTGGAGGGA
GGGACGACGG CGAAGCGAGG GGAGTGCGCG GTGGTGGCGT ATCGAGCGTG CGCGGGGACG
GCGCTGAGTG GACGGGCGGT GGCGCGGCTT CGATCGGGAC GGTGGTGCGA GGCGTTGAGA
GATGCGGAAG CGGCGTTGGA TTGCGCGCCG GATGGGGCGA AGATGCACGA ACGCATGGGA
ATCGTCTTGA AGGAGACGGA AGCGGCGGGC GATTTGGCGG AGGAGTACGC GAAGACGGCG
GAGACGCTCA AGGGGAAGCA AATGAACGGT TCGATTCGAA GCGAAGATTT CGAAGGGGAC
TCGGCGGATG AGTTGACCGC GGTCACCGCT CGACCGAGCG CGTCGAAGTG CATAGAAGAG
GAGGATTGGG TGCGAGCGCG TCAGTCGATG CTGTACGGCT CGGGCGTGCT TTTCGCCGGG
CGCGACGACG AGCGCATGTA CCGCGATCGC ATATTATTCC TCGAGCGCGC GAAGACCATT
TTCGTGATGA AAAACATGGA ATCACAAAAA GCCAGCACCT CGCCCGAGGC TGATGCGGGC
GCTGATGAGA AGCAGGTCGA CCAGTCCAAG GTTACTTGGC TCGACAACGC CTTTCTCCTC
GCCGGATTTG ACAATTTGAG CGCGTACGAT CGATCGTGCG TGTGCTTGAC CATCGGGAAC
GTGTTCTCTT GGGTCGGTCA TTTCGGCGGT GCATCGGAGC TGTATTCGTG CGGCCTGAAC
GTCATCGCGA ACTCGGCCGA AGACGAAGTC TCGGACGCGC TCGACGCGCT CGAGCCCATC
CTCGCGACGA ACCGAGTGCT TTGTCAACTT CGTAACGATC AGAGCACTAA GGCTTGGAAG
AACGTTCGCA AGCTCATGCG AGATTCGAAA CTTCGAGAAT TTGCCGCGGG ATTTCTGCGC
ATCGCCGAAG TCGCGTGCTC GCGCCAAGAG TGGGACACCG CCGAGCAAAG TTTCCGCATC
GCCGGACGCC TCGGCGCCGA GTTCCAGGTT CGTCACAAAG TCGTCATGTC GCGGCGCACG
GCTTTAGACG CTAAACCGGC GATGGTGGAC GTCGAACAGC TCGAAGAGTT GGACAAAGTT
CAAGAAGGGA CGGCGATGGA GTTCGAGGAG ACCCCGCGGT TCGCAACGAC GCCGAAACAA
AATTCTCTGA ATGACAAATC CATGCCCGAG GATTTTCATG AAGCGGCGAA AGAAATCGTT
CACGACCTTC AAGAGGCGCA TTCGCCCGCG ACGAGTCAAG ATTCTCACAG CTCACAAAGC
AAAATTTTCA CCAGTCAAGG TGGTGCGCGA TCGTTCCGTT TGAATGAAGT CTTACAGGAT
TTAGACGGTG CGATGTCGCC CACGCGGAAG AAACGCAAGA CTCGCGCCGA CGCGTGCTCG
TGCACCGAAG TCTTCTCGTT CCTCGGCTGG GGTTCGTTAG ACATTAAGAA GTCGAGCGCG
GACGAGGATA TATTTTTGGC AGCTTTGCTC GAAGCGCCGC CGTCGGATGC CGCCAACGCG
CAAGAAGCCG TCGACAAGAT GGATATCGAC GACGTGGACC TCGACGCGCT CGTGGAAGCG
ACGACGCCTG CGCCCGTCGA AGTCGAGGGC ACACACAAAG CACCGACGAC GCGACGAAGC
CGTCGATAG
 
Protein sequence
MSALERALER ARALNVDLVE LAARIERDGS GATASASARE GTLLDALDAL ARGERALGEG 
DHDRAVTAYD ECLKKCVKAW MNGRAEVSAL VANACGMLEG GTTAKRGECA VVAYRACAGT
ALSGRAVARL RSGRWCEALR DAEAALDCAP DGAKMHERMG IVLKETEAAG DLAEEYAKTA
ETLKGKQMNG SIRSEDFEGD SADELTAVTA RPSASKCIEE EDWVRARQSM LYGSGVLFAG
RDDERMYRDR ILFLERAKTI FVMKNMESQK ASTSPEADAG ADEKQVDQSK VTWLDNAFLL
AGFDNLSAYD RSCVCLTIGN VFSWVGHFGG ASELYSCGLN VIANSAEDEV SDALDALEPI
LATNRVLCQL RNDQSTKAWK NVRKLMRDSK LREFAAGFLR IAEVACSRQE WDTAEQSFRI
AGRLGAEFQV RHKVVMSRRT ALDAKPAMVD VEQLEELDKV QEGTAMEFEE TPRFATTPKQ
NSLNDKSMPE DFHEAAKEIV HDLQEAHSPA TSQDSHSSQS KIFTSQGGAR SFRLNEVLQD
LDGAMSPTRK KRKTRADACS CTEVFSFLGW GSLDIKKSSA DEDIFLAALL EAPPSDAANA
QEAVDKMDID DVDLDALVEA TTPAPVEVEG THKAPTTRRS RR