Gene OSTLU_27978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27978 
Symbol 
ID5005994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp47637 
End bp50169 
Gene Length2533 bp 
Protein Length824 aa 
Translation table 
GC content54% 
IMG OID640421415 
ProductCytB family transporter: NADPH oxidase-like protein 
Protein accessionXP_001421823 
Protein GI145355134 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.125411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACA CGCTGACGAT TTATGAGCAG CGGAAGATGC TGTTCTTGGC GGTGGCGCAC 
GCGATGGCGA CGATGGTGGT GTGGTCGCAC TTTTTCTTGG TCAAGTATCG CGCGACGGCG
AAGGTGCCGC GCGGGGCGAA TTTGTATTGG TGGAAGCGAC TGACGCCGCC GTTTGAGTTC
GGGGCGATGC ACGCGATTTT GTTTCAGATG GCGCTGCTGC CGCTGACGAT GGCGCGACAG
AGCGTGGCGG CGCTGTCGAC GACGTCTTTC GGAAGGAAGT TTGTCCCGCT GCACAAAGTC
GTGGCGATGC ACATTCACCT CGGGTACGTC ATGGTTTCTT TCGTGTTCGC GTCGACTATT
TTGTTCTTCG TGTTCTTCGG ACAAGGTTGC GCGCAGCAAA AGTCGGGTAA AGAGCCGACG
CCGGGCGGGC AGCACACGTT TTGTCACAAG ATGACGAGCG AAATCATGGC CACCGGGTTG
GCGATTATGG GATGCTTGCT GCTCGTCGCG GTGACGTCGT ACGCGAGAAA TCGAATCAAG
TACGAGATCT TTTACTACGT TCACCACTTC GTATTCATCA TGTTTGCGCT CGCAATCGCG
CACACGCTGG ATGATAAGGC CCGACGCGGA CAGGTGCGCT CGCAAAACTT TAAGTGGTTC
TCCGCATCGC TCGTATGGTA CTTGACGGAC CGATTGCAAG CGTCGTTCAA CATACGAGAT
TGTGACGTCG TGGAGTGCGT CGCGCTCGGT GACGACGAGC CGGAGTCACG TAAAGTGGTG
CACTTGCGCA TTGTGCGCCC GGAGACGTTC ATTTTTCGTC CAGGTCAATA TGTCTTTATC
AACGATCGCA ACATCGATTA CACGTGGCAT CCGTACTCGA TTGCGTCGTC ACCGCACGAG
GATACGATTG ACTTTTACAT CGAAGTCATG TCGACGAGCA GAGTCGATGG CGCAAATAGC
TGGACGAATA AGCTCTGGCG CGACGCCCGG GATGGGTTTG TATCCAAAAT GCGCATTAAT
GGACCGTATG GCACCGGATT TAACGACATC GACGACAAGA CGGAAATCGT GGCCATCGGC
GCCGGGACGG GCATCGTTCC GATGCTTTCC TTGGCGAAAG CCAAGGTGAA CGAGTTCGTA
CGAATGAATG CTCAAGCGCG GTTGTCTGAC TTGGCCGCCA GAGACGCCAA AAATCGCAAG
TTCGCGGACA ATTATTTCAA AGAGTCTTAC ACGCTGAAGG ACTTCGTCTA TAAACAGCTC
GGCCTCGCGA AGAAGGAATC GAAGGCCAGC GAAATGTGGG CGAGTCGAAG CGTTCAAGAC
ATATTTTTGC ATAAGCAGTG CGCTTGGCGC GAAGCGAAGT TGCGAGAAGA AGGTGATAAC
GCCACGAAAC GTCATTACGA GAGACTTCTC ACGAAGAATG TCTTGCACGA AGTCGTGGAC
CTCACGCAAA TCGGGTTCCC GCTGCTCGAC TTAACCTCCA TCGCGTTACT CCTTTCTTTC
TCGAAAAACT TTGCAATCGC CACGCAAGCC ATGCGAGAAG TCCCACTGTG GGCTTTCTTC
GTATGCCACT GCTATTTCTT CGTTCACTGG GTGTTCACCA GAATGAACGC CCCTATTTGG
TGGATAGATC TCATCTTCAA CGCCACGTCA ACCGTGGCGT TCACCGCCTG GTACAACTTG
ATTCGTGAAG ATCGTAAGGA ATGGAATGTC TACATGATTT GGGCGTTCGC CGCACTCTCG
GTGTACCGAA TCGCTCGAAT CTCCAGTGAC GTTCTCTTAA CAGGCACTCC TGGCTCGCGC
GCCGTCAACG CGTATCTCGA AAAAACGGGC GACGCGACGA GCGTGACTGA AAAGTTCACG
CTCATCTTCA TGACGCCGCA GGTTGACTTC TGCCAAATCC TCTGGCGTGA CTTGGACTCT
CTTCATCAAT CGATTACAAA GAATTATGGC GAGCAAGCTT CGCGTGTTTT CGACATTCAA
GTCTATTGCA CGTCGAGAGA CTCGGCGGAA AACGAAGAAT TGAAGAAGCG CGTCAAGGGC
ACTTCGCTCG GCGCCGCCGG CGCGCTTCAT ATGGAGCGCC CTGACTTGGA CGAGATCACG
TCTCGCCCCG TTCTTCAACA AGTGCTAAAG GATCAATTTA CCGGAGAGGA CAGACCATCG
TTCACGGCCA GCCTCGTCGC CTTTTGCGGC AGCACGCAGC TCGGTTCAAA AATTGCGCTC
GCCGTCGTTC GCTCGAGAGC TCGCGTGAAA GCCTTCACCG AAAATCACTC CATCGAGTTT
CTTCAAGAAA ACTACGGCCA AGCGACGCCC GCGAAAGATC GCGGTCGCGC CTCTTTCAAA
CAGGTCAGAG TCGAGCCTGC ACCAACTGTA TCCGGCGTCG TCGGCAACAT CGTAAACGTC
GGCCGCGCCG CGGCCAACGT CGCCGCCGTC GCGCTCAAGA CCGTCGGACC GAAGACGACG
AAAACGTCCA ATTGAACGGC CACCGCGCCG TGATCCCAAA CGTCATTGTA AATTAATCAT
CTTGTAATTT TGC
 
Protein sequence
MKYTLTIYEQ RKMLFLAVAH AMATMVVWSH FFLVKYRATA KVPRGANLYW WKRLTPPFEF 
GAMHAILFQM ALLPLTMARQ SVAALSTTSF GRKFVPLHKV VAMHIHLGYV MVSFVFASTI
LFFVFFGQGC AQQKSGKEPT PGGQHTFCHK MTSEIMATGL AIMGCLLLVA VTSYARNRIK
YEIFYYVHHF VFIMFALAIA HTLDDKARRG QVRSQNFKWF SASLVWYLTD RLQASFNIRD
CDVVECVALG DDEPESRKVV HLRIVRPETF IFRPGQYVFI NDRNIDYTWH PYSIASSPHE
DTIDFYIEVM STSRVDGANS WTNKLWRDAR DGFVSKMRIN GPYGTGFNDI DDKTEIVAIG
AGTGIVPMLS LAKAKVNEFV RMNAQARLSD LAARDAKNRK FADNYFKESY TLKDFVYKQL
GLAKKESKAS EMWASRSVQD IFLHKQCAWR EAKLREEGDN ATKRHYERLL TKNVLHEVVD
LTQIGFPLLD LTSIALLLSF SKNFAIATQA MREVPLWAFF VCHCYFFVHW VFTRMNAPIW
WIDLIFNATS TVAFTAWYNL IREDRKEWNV YMIWAFAALS VYRIARISSD VLLTGTPGSR
AVNAYLEKTG DATSVTEKFT LIFMTPQVDF CQILWRDLDS LHQSITKNYG EQASRVFDIQ
VYCTSRDSAE NEELKKRVKG TSLGAAGALH MERPDLDEIT SRPVLQQVLK DQFTGEDRPS
FTASLVAFCG STQLGSKIAL AVVRSRARVK AFTENHSIEF LQENYGQATP AKDRGRASFK
QVRVEPAPTV SGVVGNIVNV GRAAANVAAV ALKTVGPKTT KTSN