Gene OSTLU_27966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_27966 
Symbol 
ID5005978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp30850 
End bp31860 
Gene Length1011 bp 
Protein Length336 aa 
Translation table 
GC content63% 
IMG OID640421399 
Productpredicted protein 
Protein accessionXP_001421815 
Protein GI145355117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.433937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG ACGCCGAGTT CGATCGCGTG GAACGGGCGC GACGGGAGCG GGAGATGAAG 
AGCGAGGCGC GCGCGAACGC GGGGTTGGGG TTCGGACGGG CGAGAATGTT GGACGACTTG
AACGTCGATT TGTCGGCGGC GTTGAGAAAG CGCGAGGACG AGGACGATGA GGAGGACGAT
GAGGAGGACG ATGAGGAGGA CGAGGATGAC GACGACGCGG AGGGCGAGCG ACGAAGACGG
CGACGCGATG CGGAGGGACC GCGATTATTG AGCGACGGCG CGTCGGCGTT GTTCGCGGAC
GCGACGCGAG ATCCGGCGCT GCGATACGTC GATAAGAATG GACGCGTCAA GGGCGAACCG
ACGGCGTTGG ATCTGGCGAC GACGAAGAAG GGAGACAGTA AGTATAACCT GCGCGGTTGG
AATTACGCGC CGACGCGAGC GGAGAAAGGG CGGTGGCAAA GAGAGTGGGA AAAGGCGGAA
CGCGCCAAGG CGCTCAAGAC GCCCGGGTAC AGACCGCAGA GCGGAATCGC GATTAAATCG
AAAATTAAGG ACGCGACGTT CATGCCGGTC AAGGCGTTCG CGGATTTAAC GGATGAAGAG
AAAGCCGCGC GACGGGCGGC GGATCAGGTC AAGTACGCGA AGATTAAGGA GGACTTATTG
CTCACCACGG CGGGCATGGC GGGCTCGGGC GCCGTCGCCG CCTTCGCCGT CGGCGGCGCG
AACATGGGTT ACTCTTGGCT TCTCGGCGCC GCGGGTGCGA TCGTGTACGT CCGCTTACTC
AGCGGCAAAG CGGAATCCGA GAGCGTTCAG GGCGGTCCAC CGAGTATTTT AGTACCCGTC
ATTCTCTTCA TGGCGCTCAA CCGGTGGAAC ACGCTCTTCG CCCCCGACGT CGGCGTCGCG
TTGACGCCCA TCCCGATGCT CCTCGCGTTT TTCACGTACA AGCCCGCCAG CGTGCTTCAG
GCGTTCAAAG ACGTCTTAGC GAACCCCGAA GACGCGGACG ACGCGGAATA G
 
Protein sequence
MDIDAEFDRV ERARREREMK SEARANAGLG FGRARMLDDL NVDLSAALRK REDEDDEEDD 
EEDDEEDEDD DDAEGERRRR RRDAEGPRLL SDGASALFAD ATRDPALRYV DKNGRVKGEP
TALDLATTKK GDSKYNLRGW NYAPTRAEKG RWQREWEKAE RAKALKTPGY RPQSGIAIKS
KIKDATFMPV KAFADLTDEE KAARRAADQV KYAKIKEDLL LTTAGMAGSG AVAAFAVGGA
NMGYSWLLGA AGAIVYVRLL SGKAESESVQ GGPPSILVPV ILFMALNRWN TLFAPDVGVA
LTPIPMLLAF FTYKPASVLQ AFKDVLANPE DADDAE