| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_18554 |
|---|
| Symbol | |
|---|
| ID | 5006063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009370 |
|---|
| Strand | + |
|---|
| Start bp | 264676 |
|---|
| End bp | 266331 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | |
|---|
| GC content | 70% |
|---|
| IMG OID | 640421484 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421895 |
|---|
| Protein GI | 145355286 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0184372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0131926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC GCCTGCAGCC GTGGGCGAGC GTCCGGGAGT GGCGCGACGT CCGCGACGCG
CTCGCGCGCG CGACGGAGGA CGAGGCGCGC GGCGACGGCG CGCGACGCGG CGCCGCCGGG
GACGTCGAAA TCGACGCCGC GCTCGGCGTC GTGCGCGCGT GGCGCGCGCG CGGGCGCGCG
CCGCTCGCCG CGGACGTCAC CGCGATGCTC GTGCGCGCGT CGCGCGCGCG CGAGGGCGTC
GATCGAGGCG ACGCGGACGC GGCGCGGTCG GCGACGGCGA TGACGCTCGC GAGACTGGTG
AACGGCGTCG TCGACCCGAA GCAAAAGGGA CGGTACGCCG CGCCGATCGC GACGCTGGCG
CGAGAGGTGG GACTGCCGCG ATTTTTAGTG GATCTGCGAC ACGAGTGCGC GCACGGGACG
ATGCCGAGCG CGGGAGCGCT GCGGAGGGGC GCGCGGCGAG CGTTGGCGTG GTGTCGACGA
TGGTATTGGG ACGAACAGGC GCGGGCGTTC GACGCGGCGT TCGAACGCGT GCGGGGATGC
GTGCGAGCGA TGTGCGCGTG CGAAAAAGAC GCGAGAGGGC TGCGGGCGCG GGAGGGACGG
GGCGCGGTGG AGTCGTCGAG CGAGGAGATG GACGAGGACG GGGCGAGCGA GGGCGAAAAC
GCGGGACGGG AGAGCGAGGG CGGGACGTCG TTTAAGGACG TGCGAGAACG ACGACGACGG
GCGATCGGAA CGTTGAGCAG CGTGTGTCCG AAGGGCGCGG CGCACGTCGT GGCGGAGGCG
TTGCTCGACG GGGGGTGGCT CCGCGTCGTG GAGGACGAGA CGGCGAGCGA CGTCGACGAC
GCCGACGAAG CGACGTTTCG CGCGAGCGCG GAAGATTGGC GGCCGACGCT CGAGCGACTG
TGTCAGAAAT GGACCGGTTT GTTCGCGTAT CTGTTCGACG CCGCGATTCG AGGCGAGAAA
CCGGGAAACG ATGTGGGGTT TCAAACTTTG TTGAGCGTCG CGGCGAGCGG CGACTTCGCC
GCGAACGGCG ATCAGCGCGT CGCCGCGTTC CACGCGTGCA AACGCGCGCT CGCGAGCGTG
CACGAAGACG ATTGGAGCGA TGACCCGGCG GTGGCGAAGA GAACGATCCG GACGCTGCAA
AAAATTGCCG GCGTGTCAAA GGATGAAATC AAATCCGCGT CGCGTCGCGG CGCGGCGCCC
GCGGACGCGC TCGCGAGCGC GAGAGCCGAC ATCGAGGCGC TTCGCGCGAC GCTTCAGTCC
GGTCGTAAAC GCAAGCGCGA TTCGCGCTGG GAACGGGCGG AAGATTGGAC GCCGTCACCC
ATAGGCGTCG TCGCGGGCGT CTCGGCGCGC GCGTTGGTCG ACGTCGCGCC GTCGTCGCGA
ACGATTCGCG TCACATCCGG TGTCAGCGCG TCGAGCGACG CGGGGTATCG AAGCGCCACG
AAATCGGCGA CGTATCCACG CGGCGACGAC GGTGACGACG ACGACGCCGC CGACGACGAC
GAGGACGAAA ACGACGACGA GGACGAAAAC GACGACGGCG GCGAACCGTC CGAACGCGTC
GGCGTCGCCG CCGCGCTCAA CGTCGCCGGC GGTCGCGTGG AGCTCTCAAA ATCGCAAGCC
GCCGCCGTGG CGGCGTCTGT GGCGTGTCTG CTTTAG
|
|---|
| Protein sequence | MSARLQPWAS VREWRDVRDA LARATEDEAR GDGARRGAAG DVEIDAALGV VRAWRARGRA
PLAADVTAML VRASRAREGV DRGDADAARS ATAMTLARLV NGVVDPKQKG RYAAPIATLA
REVGLPRFLV DLRHECAHGT MPSAGALRRG ARRALAWCRR WYWDEQARAF DAAFERVRGC
VRAMCACEKD ARGLRAREGR GAVESSSEEM DEDGASEGEN AGRESEGGTS FKDVRERRRR
AIGTLSSVCP KGAAHVVAEA LLDGGWLRVV EDETASDVDD ADEATFRASA EDWRPTLERL
CQKWTGLFAY LFDAAIRGEK PGNDVGFQTL LSVAASGDFA ANGDQRVAAF HACKRALASV
HEDDWSDDPA VAKRTIRTLQ KIAGVSKDEI KSASRRGAAP ADALASARAD IEALRATLQS
GRKRKRDSRW ERAEDWTPSP IGVVAGVSAR ALVDVAPSSR TIRVTSGVSA SSDAGYRSAT
KSATYPRGDD GDDDDAADDD EDENDDEDEN DDGGEPSERV GVAAALNVAG GRVELSKSQA
AAVAASVACL L
|
|---|
| |