Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_18546 |
Symbol | |
ID | 5006057 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009370 |
Strand | + |
Start bp | 248783 |
End bp | 251121 |
Gene Length | 2339 bp |
Protein Length | 617 aa |
Translation table | |
GC content | 61% |
IMG OID | 640421478 |
Product | predicted protein |
Protein accession | XP_001421890 |
Protein GI | 145355275 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.638147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000612051 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGGAGG CGTTGCGAAA GCGGCGGCGA CTCGAGGCGG CGCGGCGACT GTTGGGCGTC AAGCGCGGAA ATCGCGACGA GGACGCGAAC GAGGGAAGAG ACGCGGGAGA TGAGGGTTTG GATGGCGTGG ACTCGTTGGA CGCGTACATG GCGCGCGAGG TGGATCCGGA GGTGGAGAGG CGACGTCGCG CGGAGGCGAC GGCGGCGGCG GAGGCGAAGC GACGACGCGC GATGGAGATC GCCGAGGCGA AGGCGCGAGG CGAACGCGTG CGCGCGCGAG AGGACGTGGT GATGTTAGAG CGCGCGGAGG CGGAGGCGGA GGCGACGGTG ACGCCGGACG AGGTGATTGA GATTCCGAGC GGTAAGGTGA AGTTGCTGAT AGGCGCCGGC GGGTGCAACG TGAAGGAGGT GATGCGTAAG AGTAAGGCGA TGGTGCAGGT GCTGAAGAGC GAGGGGGCGA TGAATGAAGG GTTTTCGGGG ATGGACATAC ACGCCGCGAA CGCGGCGGCG CGCGTCGCGA CGCAGAGAAT GTTGGACGCG ATTACGGCGA GCGTCGCCGT CGGCGAGGAC GTCGGCGAGG AAGACGCCGG CGAAGGCGAC GACGTTTTAG CGCCGAAAGA TAAAGCATCG AACGCGACGA AAACAAAAAC CACGACGGAT GCACCAGCCA TGACAAAAAT CATGATCAAC GGTAGTGAAG AGGCGCGAAC GATGGCGAAG CGGTTGATCG AGGAATTGTT CCAACGCGCC GTCGAGGAAA AGCGTGAACG CCGCGGCGAG GATCGCGAGC GTAAAAAAGA ACAGCGCGCG CGGGAGCGGC GAATGTACCA CTTGCGACAC GTCGCTGATT ACGAGCGTTT AGAAGTTCCG CTCGGGGCAC CGAAGGACGA CGTGAAGTCG GCGTATAGAA AGCTCGCCGT GCGCTGGCAC CCCGACAAAC ATCCCGAGGG TCCGGCGCGC GTCGCCGCGG CGGAGCGCTT CGCCGTCATC CAAGCCTCGT ACAATAACCT CATGACCACG GACGAGGAGC AAGGAATGAT GGGTTCGATC GCACACACGT CGACGCAATC GAAATCGGCG AAGCCGCCAC CGAACGTCGT CGAAGCGCGC AAGGCGCTCG AGACGCGCGC CGAATTCGAG CGCGCGCTCA AGGCACAAAT GGCCGCCACC GAAGCCGCCG CCGCGCGCCG CGCGTATAAA ACTTTGTAAT CTTTATAGAA TCGTAGCCCT CATCGAGCGT CAGTCGCACG CGCGCGCGTT GAGGACGCCA TCGAAAACGC CGTCTCGCGC GCGCCGAATC TGGATCCTCA CACCGCGTCC AACCTTTCAT CCCACGATGC CCAGCTGCCC GCGGTTGCCC TCCTGCACGG GTCGCTCTCC GGTACGCGCG CGATCTCGCG CGCGCGCCTT CGCGCCGTCG TCGCGCGCGC TCGAAAGACT GAAGAAGCGT AACGACGTCC ACTTTGAAAC ACTTTGACGA CAAAGACTGA CGACGACGAC CGCACGCGCC CGATGACGCG CAGTTACCGT GGACGATGAT CACCTGGGGC TTGTGGATCA TCCTATCGAG CATCAACATC GCGAGTGTGT GTTTGGTGGC GCTCACGGCG AAGGTACGCT CGGCGCTCGG CGCGCGCTCG GCGCGCGCTC GGCGAAGCGA ATTTCATTCG GGCGCTCAAA ACGACAAAGA CTGACTGAAT GCGTTCAATT CGCGCGCGCA GTATATAAAA AATGTCGTGG ACCCGGTCAC GGCGAAAGAT TTGTTGGAAC CAATTCATGC GATGAGGTCT TACATGGCGG GCGTGTGCGT GGCCGTGGTG GCGTTTCACG TGATTTCGTT GTTCACACTC TTGTACAAGA CGACGAAAAA GGGTGGCGTG ACGCCGTGGT ACGGTTTCGT TCTCGGCGGA ACGTTTTACA TGATATTCAT CATGATAGGT CAAGGACTCT TTGCGGGCGC GTTTCATCCG AATTTCGCGG CGATTCACGA CTACCAAGTG TCGCAAAACA ATCCGGGAAT TTATGGAAAG ACGGAGTCGG ATCGAAGCAA GGCGTTGGAG GGGCTGTCGT ACACGAGCGC GGCTTTGTTC AGCGTTTCGT TTCTGATTTT GTTGTTCTAC CGGGACACGA TTTGCGGTGC GACAGTACCA CGAGAAGTGG CATCGGCGCC GCCGCCGGTT GCGTCGTCGA CGCGGTCAAA GTCAAAGAAG GGTGCGTTTC GCGCCACGCA GCTGAGCGAC AACGCGGCGT CTCCGAGCCA TTCGGTTGTG GAAATGGGCG AGAGAAGCGA TGGAGGATCG TCGCTTAGAT TCGGCGCCGA TAGATTTGCC GCGTCTTAG
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Protein sequence | MEEALRKRRR LEAARRLLGV KRGNRDEDAN EGRDAGDEGL DGVDSLDAYM AREVDPEVER RRRAEATAAA EAKRRRAMEI AEAKARGERV RAREDVVMLE RAEAEAEATV TPDEVIEIPS GKVKLLIGAG GCNVKEVMRK SKAMVQVLKS EGAMNEGFSG MDIHAANAAA RVATQRMLDA ITASVAVGED VGEEDAGEGD DVLAPKDKAS NATKTKTTTD APAMTKIMIN GSEEARTMAK RLIEELFQRA VEEKRERRGE DRERKKEQRA RERRMYHLRH VADYERLEVP LGAPKDDVKS AYRKLAVRWH PDKHPEGPAR VAAAERFAVI QASYNNLMTT DEEQGMMGSI AHTSTQSKSA KPPPNVVEAR KALETRAEFE RALKAQMAAT EAAAARRAIN IASVCLVALT AKYIKNVVDP VTAKDLLEPI HAMRSYMAGV CVAVVAFHVI SLFTLLYKTT KKGGVTPWYG FVLGGTFYMI FIMIGQGLFA GAFHPNFAAI HDYQVSQNNP GIYGKTESDR SKALEGLSYT SAALFSVSFL ILLFYRDTIC GATVPREVAS APPPVASSTR SKSKKGAFRA TQLSDNAASP SHSVVEMGER SDGGSSLRFG ADRFAAS
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