Gene OSTLU_18532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_18532 
SymbolRPS2 
ID5005911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp221516 
End bp222337 
Gene Length822 bp 
Protein Length273 aa 
Translation table 
GC content61% 
IMG OID640421332 
ProductCytosolic 80S ribosomal protein S2; Cytosolic 40S small ribosomal subunit protein S2 
Protein accessionXP_001421882 
Protein GI145355259 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00101869 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0391039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATC GAGGCGGATT CTCCCGCGGT TTCGGCCGCG GTGGTGAACG CGGTCGCGGT 
GATCGCGGTC GCGGTGATCG CGGACGCGGC GATCGCGGAC GCGGACGCGG ACGCGGACGC
GGACGCGGCG GCGACGACAA GGATGTGTGG GTGCCGTGCA CCAAGCTCGG TCGTCTCGTG
CAACAAGGGA AGATCAAGTC GCTCGAACAC ATCTTCTTGT TCTCTTTGCC GATCAAGGAG
CACCAAATCG TTGAACACTT CATCGGTGGG GAGCTTAAGG ATGAAGTTAT GAAGATTTGC
CCGGTTCAAA AGCAAACCAC GGCGGGTCAG CGCATGCGCT TCAAGGCGTT CGTCGTCGTC
GGCGACTGCA ACGGTCACAT CGGTCTCGGT GTCAAGGCGT GCAAGGAAGT CGCGCACTCG
ATCCAAGGTT CTATGATTTT GGCCAAGCTC AACATCGTTC CGGTGCGCCG AGGTTACTGG
GGCTCCAAGC TCGGTGAGCC GCACACCATC CCGACCAAGG TTCACGGCAA GTGCGGTTCC
GTGCACGTTC GTCTCATCCC GGCGCCGCGT GGTGCGGGTA TCGTCGCGTC CGGTACCGTT
AAGAAGGTGC TCGCCATGGC GGGTCTCCAC GACGTGTACA CGTGCTCTAG AGGTCACACC
CGTACGCTCG GTAACTCCGT GAAGGCGACG TACGAAGCGC TCAAGAATTC TTACGGCTTC
TTGACGCCGG ATTTGTGGGC TGAGACTCGT TTCGCGAAGC CGCCGGCGCA GGAATTCACC
GATTTGCTCT CCAAGCCGGA CCGCAAGGCT CGCGATTACT AG
 
Protein sequence
MSDRGGFSRG FGRGGERGRG DRGRGDRGRG DRGRGRGRGR GRGGDDKDVW VPCTKLGRLV 
QQGKIKSLEH IFLFSLPIKE HQIVEHFIGG ELKDEVMKIC PVQKQTTAGQ RMRFKAFVVV
GDCNGHIGLG VKACKEVAHS IQGSMILAKL NIVPVRRGYW GSKLGEPHTI PTKVHGKCGS
VHVRLIPAPR GAGIVASGTV KKVLAMAGLH DVYTCSRGHT RTLGNSVKAT YEALKNSYGF
LTPDLWAETR FAKPPAQEFT DLLSKPDRKA RDY