| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_13352 |
|---|
| Symbol | |
|---|
| ID | 5006043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009370 |
|---|
| Strand | - |
|---|
| Start bp | 198793 |
|---|
| End bp | 200352 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640421464 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422003 |
|---|
| Protein GI | 145355508 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.585988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCGC AATTCTTCAT CCTGAGCCCG CGCGGGGACG CGCTGGTGAC GAAAGACTTC
CGCAGGGACT TGCCTCGACG CACGCACGAG ACGTTTTATC GAACCGTGCG CGCGTGGGCG
CGCTCGCGGC GGCGTGAGGA CGGCGAAGAG GATGCGGAGG AATCGGCGAT GGGCGAACAT
TCTCGGGAAT ATAGCGGCGC GCCGGCGGTT TTTCGCGAGG ATGGGGTGAA TTACGCGCAC
GTCAAGGCGA GTGGGCTGTA CTTTGTCGCG ACGACGACGC GAAACGCGAG CGGGAGCGTG
ATATTAGAAC TTTTGCATCG GTTGGCGAGA TTGGTGAAGG ATTATTGCGG CGCGCTGACG
GAGGACGCGG TGAGGAAAAA CGCGACGTTG GTGTACGAGG TGATCGATGA GGCGATGGAT
TATGGATACG CACAAACGAC GTCGACGGAG ATGCTTCGCG AGAGGGTATG TAACGAACCG
GTGGAAATCG GAGGGGGGTT GGCGGGGATG CTGGTGAGCG CAAAGGCGGA TTCGACGAAA
ATCGCGGCGG GGGCGCTCAA GGCGGGACAG AAGGTTGAGA CGATGTTTAA AAATAATCTG
GGGATGAGAG TCAACTTTCC GACCAAGGCG GCGATTAATT TAATGAACGC GGCGTCGGTG
GCGAGTGGGG TGAATAGAGT TTCTAGCAGC GCGACGCAAA AGAGCGTGGT GAGCGCGTCG
AGCGCGACGA CTCGGGATGA GATTTTCGTG GACATCATCG AGAAAGTGAA CGTGACGTTC
AACGCGAATG GAGATGTAGT AACGTCTGAG ATCAATGGGC ACATTCAAGT ACGGAACTTT
TTGCAAGGTG AGGACACAAA GGTGAAGCTG GCGCTGTCGG AAGACTTGAC CATTGGCGGG
AAAGGTGCGA GCGCGGGTGG CGCGTATACA GGCGTCATCC TCGATGATTG CAACTTCCAC
GAGACGGCAA ACTTGGATCA GTTCGACATC GATCGTACGA TAAGTTTACG ACCGCCACAA
GGGGAGTTTT CGTTGATGCA CTATCGAAGC GCCGACGACT TCAAGCCTCC ATTTAGAATC
GTACCGATCA TCGACGAGAG CGTACCGTAC AAAGTGGGCA TCGAGCTCAA GCTCTACGCT
GACTTTAACG CAAAACACAC GTGTACGGGG TGTATCGTAA CCTTGCCAAT CCCCAAAGGT
GCGATTGGCG CCACTGCTCG ATTGCCAAAG CACGTCACGG CAAGCACGCA GCACGTCATG
TACGACGCCG CCGAAAAGCA AATCGTCTGG CAGTTCAAAA AACTACCCGG CGGTTCCGAT
CACGAGTGTT CTGTACAAAT CTCGCTGCAA TCCGAGCGCA TTCCAAACGT TCGTCGAGAG
ATTGGTCCGC TATCGTTGAC GTTTCAGATT CCAACCTTTA GCGCGAGCGA CCTCGCCGTG
CGCTACCTCC AAGTCGTCGG CTCTTCCAAC GAGCCTCGTC ATCGCGATGA CCCACCGCGA
AATCCACACA GATGGATTCG TTACATGACC AAGAGTTCGT CCTACGTTGT TCGCATTTAG
|
|---|
| Protein sequence | MLSQFFILSP RGDALVTKDF RRDLPRRTHE TFYRTVRAWA RSRRREDGEE DAEESAMGEH
SREYSGAPAV FREDGVNYAH VKASGLYFVA TTTRNASGSV ILELLHRLAR LVKDYCGALT
EDAVRKNATL VYEVIDEAMD YGYAQTTSTE MLRERVCNEP VEIGGGLAGM LAAINLMNAA
SVASGVNRVS SSATQKSVVS ASSATTRDEI FVDIIEKVNV TFNANGDVVT SEINGHIQVR
NFLQGEDTKV KLALSEDLTI GGKGASAGGA YTGVILDDCN FHETANLDQF DIDRTISLRP
PQGEFSLMHY RSADDFKPPF RIVPIIDESV PYKVGIELKL YADFNAKHTC TGCIVTLPIP
KGAIGATARL PKHVTASTQH VMYDAAEKQI VWQFKKLPGG SDHECSVQIS LQSERIPNVR
REIGPLSLTF QIPTFSASDL AVRYLQVVGS SNEPRHRDDP PRNPHRWIRY MTKSSSYVVR
I
|
|---|
| |