Gene OSTLU_7521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_7521 
Symbol 
ID5005633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009369 
Strand
Start bp192056 
End bp192691 
Gene Length636 bp 
Protein Length212 aa 
Translation table 
GC content56% 
IMG OID640421054 
Productpredicted protein 
Protein accessionXP_001421595 
Protein GI145354657 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0283312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCGTCATCT TCTTCGACTG CGACGATTGC CTGTACAAGA ACGATTGGCG CACGGCCAAC 
GTGCTGACGG CGAAGATTGA GTCGTACACG ACGCAGAGGT TGGGTCTGCG AGACGGCGAC
GCGTACGCGC TGTACAAAAA ATACGGCACG TGCCTAAAGG GATTGATGGA GGAGAAGTAC
CTGGACACGC AGGAACACTT GGATGAATTT TTACACTACG CGCACGATAT ACCGTTGGAT
ATTGAGCGAG ACGAGAAGCT TCGAGCGATG CTGCTGAAGA TTAAGACGCC AAAGTGGGTA
TTTACGGCGT CCGTCGCGGC GCACGCGCGG CGGTGTTTAG AGAAGTTAGG AATCGATGAT
TTATTCGAAG GAATCATAGA CGTTCGCGCG GTGGGGTGGG AAACGAAACA TTCGCCTCGA
GCGTACGAAG CGGCGATGCG AATCGCGGGC GTGGACGACC CGTCCGATTG TCTGTTTTTG
GACGATAGCG TGAGCAATAT GCGCACCGCG CGCGAGGTCG GATGGACGAA CGTGCTGGTC
GGTACGCACG CTCGAGATGG AGGAGAGCTC ATCACGTGCG ATCATGCCGA TCACATCATC
GCCACCGTGC ACGAGTTCGA GGCGCTCATG CCAGAA
 
Protein sequence
RVIFFDCDDC LYKNDWRTAN VLTAKIESYT TQRLGLRDGD AYALYKKYGT CLKGLMEEKY 
LDTQEHLDEF LHYAHDIPLD IERDEKLRAM LLKIKTPKWV FTASVAAHAR RCLEKLGIDD
LFEGIIDVRA VGWETKHSPR AYEAAMRIAG VDDPSDCLFL DDSVSNMRTA REVGWTNVLV
GTHARDGGEL ITCDHADHII ATVHEFEALM PE