| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_4287 |
|---|
| Symbol | CMK |
|---|
| ID | 5005650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009369 |
|---|
| Strand | + |
|---|
| Start bp | 261786 |
|---|
| End bp | 262640 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640421071 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, putative chloroplast precursor (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) (CDPMEK) (ISPE) |
|---|
| Protein accession | XP_001421612 |
|---|
| Protein GI | 145354692 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0191245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0199906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTCTCCCCGT CCAAAATCAA CCTGTTCTTA CGAATCACCG CGCGAAGACC CGATGGATTC
CACGACCTCG CGTCGCTGTT CCACGTCATC GACCTCGGGG ACGACATGAC GTTTGCGAAG
TCGTCGAGCG AGACGAAGGA CACGCTGATC TGTAACGACC CCACGATCCC GACGGATTCG
TCGAATTTAG TGATCAAGGC GTTGGATTTG TTCCGCGCGA AGACGGGCGT GCGACAGTAC
TTTTGGATCG AGCTGGATAA AAAGGTGCCG CACGGCGCCG GACTCGGCGG CGGGAGCGGA
AACGCGGCGA CGACGCTCTT CGCCGCGAAT AAGTTGTGTG GATCGCCGGC GACGGAGGCG
GAACTGTTGG AGTGGAGTGG GGAAATAGGA AGCGATATTT CGGTGTTCTT TTCTAAGGGC
GCGGCGTATT GCACGGGGAG AGGGGAGATT GTGGAGGACG TGGAGCCGCC GTTGGATTTA
GCCACGAAGA TGTTGCTCGT GAAGCCGCCG ATGGGGTGCT CGACGCCGGC TATATTTAAG
GCGCTCGATC TCGATGGACG CTCGAAGGCG GACCCGTTAG AGTTGTTGAA ACGCATCGGC
GTCGATGGAT GCTCGGAGAC GGTGTGCATC AACGATCTCG AGGCGCCCGC GTTTACGGTG
TTGCCCGAAC TCGCCGAGCT CAAGGAACGG CTCAAGGCGG CGACGGCGGA TAAAAAGACG
GTGGTTTTCA TGTCTGGTAG CGGTAGCACG ATCGTCATCG TCGGCGACGA TGACGTTCCC
GCGTTCGTGG CGCGAGACGA CGCCCTGTTC AAGGCGCCCA CGCGATTAAT CACGAGAAAG
CCCGGCGAGT GGTAC
|
|---|
| Protein sequence | FSPSKINLFL RITARRPDGF HDLASLFHVI DLGDDMTFAK SSSETKDTLI CNDPTIPTDS
SNLVIKALDL FRAKTGVRQY FWIELDKKVP HGAGLGGGSG NAATTLFAAN KLCGSPATEA
ELLEWSGEIG SDISVFFSKG AAYCTGRGEI VEDVEPPLDL ATKMLLVKPP MGCSTPAIFK
ALDLDGRSKA DPLELLKRIG VDGCSETVCI NDLEAPAFTV LPELAELKER LKAATADKKT
VVFMSGSGST IVIVGDDDVP AFVARDDALF KAPTRLITRK PGEWY
|
|---|
| |