Gene OSTLU_40769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_40769 
Symbol 
ID5005622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009369 
Strand
Start bp139812 
End bp140117 
Gene Length306 bp 
Protein Length102 aa 
Translation table 
GC content58% 
IMG OID640421043 
Productpredicted protein 
Protein accessionXP_001421720 
Protein GI145354916 
COG category[A] RNA processing and modification
[D] Cell cycle control, cell division, chromosome partitioning
[K] Transcription 
COG ID[COG5147] Myb superfamily proteins, including transcription factors and mRNA splicing factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0145425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.460561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC AGTGGACCGT GCGCGAGGAC AAGGAGTTGC TGCAGTTGAT CGATAAATAC 
GGCGCGAAAC GGTGGAGTTA CATCGCGAGT TTAATGCGTC ACAGACGCGG AAAGCAGTGT
CGAGATCGTT ACCTGAACCA CCTTCGACCC GGAATCAAGA CTGGGGAGTG GAGCAAGGAG
GAGGAGCTGA TCCTCGTCGA GGGGCACAAA GTGCTGGGCA CGAAGTGGGC CGCGCTCGCC
AAGCTCTTGA CCGGACGACC GGAGAACGCC ATCAAGAATC ACTGGCACGC GACGCTTCGA
TGCAAG
 
Protein sequence
MTQQWTVRED KELLQLIDKY GAKRWSYIAS LMRHRRGKQC RDRYLNHLRP GIKTGEWSKE 
EELILVEGHK VLGTKWAALA KLLTGRPENA IKNHWHATLR CK