| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_40751 |
|---|
| Symbol | |
|---|
| ID | 5005771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009369 |
|---|
| Strand | - |
|---|
| Start bp | 425019 |
|---|
| End bp | 427274 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640421192 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421797 |
|---|
| Protein GI | 145355076 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00189379 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGCG CGAGGTCGAT CGAGGGCGGC GCGCACGCGC CGAGCCTGGA CGCCAAGGTC
GCGAGGGCGT TCGCGGCGTT CGATCACACG TTCACCGTGT GCGACGCGAC GAGGGAGGAT
TGTCCGATCG TGTACGCGAG CGATGGGTTC CTGCGGATGA CGCAGTACGG CGCGGACGAG
GTGATCGGGC ATAATTGTCG ATTTTTGCAG GGAGAGGCGA CGGATGGGAA CGACGTGCGC
GAGCTGCGAG AGGCGATTAA GCGGGGCGAT CGATGGAGCG TGCGGTTGTT GAATTATAAG
AAGGATGGGA CGCCGTTTTG GAATTATCTC GTCGTCGCGC CGGTGAAACT GGCGGATGGG
ACGGTGGCGA AGTACATCGG CGTGCAGGTG GACGTGACGG AGGTGAAGGA CGCGACGACG
GGCGAGCGAG GGATCGATTT CGATGAGGAA GGGATGCCAG TGCCGAGTCG CTACGACGCT
CGCGCGGCAG CCGTGTCGCT AGGGCGCGTG AGCGAGGTGG AGAACGCGGT GCGAGCGGCG
GAAGGGTTAT CTGAGGATGG CGTGGACGAC GCGGGCGCGA GGAAGGGACG CGTGGGTTTG
GATTTGGCCT CGACGCTCGA GCGCATCGAG CAATCGTTCG TCATCACCGA TCCGTCGTTG
CCCGATCATC CGATCGTGTT CGCGAGCGAC GGTTTCATGG ATTTTACTGG ATACTCTGTG
GATGAAATCT TGGGACGGAA CTGTCGGTTT TTGCAAGGGC CGAAGACGGA TCGAGCGGCG
GTGGCGAAGA TTCGTCAGGC GATCGAGCTC GGGGAAGAGT GTACGGTGCG ATTATTGAAT
TACACAAAGA GCGGAAAGCA GTTTTGGAAC ATGTTCACGT TGGCCCCCGT GCGTGATGAC
CAGGGAATTG TACGATTTTT TGCGGGCGTA CAGGTGGACA TCACCGCGCA CGATCCGAGC
ACCGAGGACG AGTCGATCGC GGAGATCACG TTCAAGGGCA CGGATGAAGA GAACATAGCC
ATATCGAAGG GCGCGGCGAG TATGGTCGCC GGTGCGACGG CAAAAGACAA AGAGTTCGAG
CCACCGTGGG TGCGCATGCA CGGGAAAATG CTCACGCCCA AGCCTCATCA AATTGAAAAT
CGTCGTCATT GGGAGGCGCT GCGCAAGGCG ACGAACGATG GCACCAGAGC TTTAACGATC
GACGACTTCG TGCCGGTAAA GCGCATTGGA CAAGGCGATG TGGGCACCGT GCACTTGGTT
ACCCTCGCCA AACAGCAAGA TATCACGTTC GCATTGAAGA TTTTGACCAA GCAGGAAATC
ATCGACCGCA ACAAGCTTCA CCGTTTGCAC ACTGAGTCGA CGATTTTGAA CGAAGTCGAC
CACCCATTCG TGGCGACGTT GTTCGCGTCG TTTCAAACCG CGACTCACGT GTACTTTTTG
ATGGAGTATT GCGAAGGAGG CGAGCTATAT GACTTCCTGC AAAAGATTCC AGACAGGCGT
CTGAGCGAAA ATGCGACGAG GTTTTACGCG GCGGAAGTAC TCGTGGCGCT CCAGTACCTG
CACTTGCTCG GATTCGTGTA CAGAGACTTG AAACCGGAGA ACGTTTTGCT ACGTCGTAGT
GGGCACATCG TTATCACCGA TTTCGACCTG TCGTTTTGCG CGACATGCAA ACCGCACATT
AATATTCAAC CTGGGAACCC GTCTTGGATC GCCGGCGAGC GAGCCGTCGA GCAAGCGTCG
TCAAAGAAGT CACTCAAGCC GCCGCGACTG CCAAAGAACG GTTCCAATCC CATGCTTATG
GCGGAACCGT TCACATTCAC GAACTCTTTT GTCGGCACGG AAGAGTATCT TTCCCCAGAG
GTTTTGAACG GTACCGGCCA CTCCGGTTCG GTTGACTGGT GGGAACTGGG CATTTTCATG
TACGAGATGG CGTACGGCAC GACACCGTTC AAATCGGCGA CGCGAGAAGA GACGTTCAAC
AAAATCTCGG ATGGGAAAGT GACGTTCCCA GATGACGTTC CCATGAGCGA CGATTTCAAA
GATTGTGTCG GTAAATTACT GCAGCACGAT ACGACAAATC GCTTGGGCAC GCTCGGCGGT
GCCGAAGAAA TTAAGTCACA CCCATTTTTC AAATCCATCA ATTGGGGTTT GCTTCGTTGG
GAAGTGCCCC CGAACATTCC AAAACTTAAG CCTACGCGCA GTGCACCACC CCCAGCCAAG
GAAGAACCGG AAGAGATGTT CGAGATCGAG GTGTAG
|
|---|
| Protein sequence | MSRARSIEGG AHAPSLDAKV ARAFAAFDHT FTVCDATRED CPIVYASDGF LRMTQYGADE
VIGHNCRFLQ GEATDGNDVR ELREAIKRGD RWSVRLLNYK KDGTPFWNYL VVAPVKLADG
TVAKYIGVQV DVTEVKDATT GERGIDFDEE GMPVPSRYDA RAAAVSLGRV SEVENAVRAA
EGLSEDGVDD AGARKGRVGL DLASTLERIE QSFVITDPSL PDHPIVFASD GFMDFTGYSV
DEILGRNCRF LQGPKTDRAA VAKIRQAIEL GEECTVRLLN YTKSGKQFWN MFTLAPVRDD
QGIVRFFAGV QVDITAHDPS TEDESIAEIT FKGTDEENIA ISKGAASMVA GATAKDKEFE
PPWVRMHGKM LTPKPHQIEN RRHWEALRKA TNDGTRALTI DDFVPVKRIG QGDVGTVHLV
TLAKQQDITF ALKILTKQEI IDRNKLHRLH TESTILNEVD HPFVATLFAS FQTATHVYFL
MEYCEGGELY DFLQKIPDRR LSENATRFYA AEVLVALQYL HLLGFVYRDL KPENVLLRRS
GHIVITDFDL SFCATCKPHI NIQPGNPSWI AGERANGSNP MLMAEPFTFT NSFVGTEEYL
SPEVLNGTGH SGSVDWWELG IFMYEMAYGT TPFKSATREE TFNKISDGKV TFPDDVPMSD
DFKDCVGKLL QHDTTNRLGT LGGAEEIKSH PFFKSINWGL LRWEVPPNIP KLKPTRSAPP
PAKEEPEEMF EIEV
|
|---|
| |